Gene RSc0558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0558 
SymbolpilA 
ID1219363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp602739 
End bp603245 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content60% 
IMG OID637236917 
Producttype 4 fimbrial pilin signal peptide protein 
Protein accessionNP_518679 
Protein GI17545277 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4969] Tfp pilus assembly protein, major pilin PilA 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.791178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCGA TGCGTCATCT CAACAAGCGT GTCCAGAAGG GTTTCACGCT GATCGAACTG 
ATGATCGTGG TCGCGATCGT CGGTATTCTG GCTGCGATTG CCATTCCGGC CTATCAGGAC
TACACGGTTC GTGCACGCGT GACGGAAGGT CTGTCGCTGG CTGCGCAAGC CAAGGCGCTG
GTGTCGGAAA ACGCTGCCAA TGCACAGTCT GACCTGTCGG TGGGTTCGTC GGTGTTCACG
CCCACCAAGA ACGTTGCCAA CTTGACGATT GCTGGTACGG GTACTGTTCC GGGTCAGATC
ACCGTCACCT ATACGACGGC AGCTGGCGGC GGCACGCTGG CTCTGGTTCC GACTGCGGCT
GGTACTGCAC TGCCGGTTAG CTCGGCACCG TCGGGCCCGA TCATGTGGAC CTGCTACGCT
CAGAATAAGG CTCAGGCTGC TAGCAGCGTT GCTCCGAGCG GTACGATGTC GCTGGCAGCG
AAGTATGCTC CGGCAGAATG CCGCTAA
 
Protein sequence
MKSMRHLNKR VQKGFTLIEL MIVVAIVGIL AAIAIPAYQD YTVRARVTEG LSLAAQAKAL 
VSENAANAQS DLSVGSSVFT PTKNVANLTI AGTGTVPGQI TVTYTTAAGG GTLALVPTAA
GTALPVSSAP SGPIMWTCYA QNKAQAASSV APSGTMSLAA KYAPAECR