| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0556 |
|---|
| Symbol | |
|---|
| ID | 1219361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 601059 |
|---|
| End bp | 601757 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637236915 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_518677 |
|---|
| Protein GI | 17545275 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0861] Membrane protein TerC, possibly involved in tellurium resistance |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCTCA CCTCCAGCGC ATTCTGGTTC GCACTTGGCT CCATCATCCT GACCAACATC
GTGCTGTCGG GCGACAACGC TGTCGTCATC GCCCTGGCGG CACGCAATCT GCCTCGCCGG
CAGCAGCGGC AGGCGATCTT CTGGGGCAGT GCCGCGGCCA TCGCGCTGCG GATTGCGCTG
ACCGTGCTGG CAGTCAAGCT GCTGGCGCTT CCTTATCTGA AAACGATCGG TGCGGTGCTG
CTGGTCTACA TCGGCATCAA GCTGCTGAGC GAAGCCGAAG ACGAGGCGGC AGGAGAGCAC
CGCCCACACG ACGGCCTGTG GCCCGCCATC CGAACCATTC TGATTGCCGA CCTGGTGATG
TCGCTCGACA ACGTCGTCGC CGTGGCCGCC GCGGCAGAGA AGGGGCCGCC GGGGACCGAC
GTTGCGTTGC TCGTGCTGGG GCTCGGGCTG TCGATTCCGC TGATCATCTT CGGCAGCACG
CTCCTGGTGG CACTGATGGT GCGGCTTCCG CTCATCGTCA CGCTCGCGGC GGCACTGCTC
GGCTATCTGG CGGGCGACAT GCTGGTGACC GATCCGGTGG ACGCCGGCTG GTTCATGCAA
GCCATCCCGT ATGCCGATGT CGCGATCGGC TGTCTTGGCG CGTTGATCGT CGTGATCGTG
GGCTGGTGGA TGGGGCGGCG TTCACTGCGC CAGGCGTGA
|
|---|
| Protein sequence | MALTSSAFWF ALGSIILTNI VLSGDNAVVI ALAARNLPRR QQRQAIFWGS AAAIALRIAL
TVLAVKLLAL PYLKTIGAVL LVYIGIKLLS EAEDEAAGEH RPHDGLWPAI RTILIADLVM
SLDNVVAVAA AAEKGPPGTD VALLVLGLGL SIPLIIFGST LLVALMVRLP LIVTLAAALL
GYLAGDMLVT DPVDAGWFMQ AIPYADVAIG CLGALIVVIV GWWMGRRSLR QA
|
|---|
| |