| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0538 |
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| Symbol | |
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| ID | 1219342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 580686 |
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| End bp | 581708 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637236896 |
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| Product | putative transcription regulator protein |
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| Protein accession | NP_518659 |
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| Protein GI | 17545257 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0548249 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.54431 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGTC CTGGCGCAGG AGACACCAAG AACCGCATTC TGGAAGCCAC CGAACTGCTG
TTCATCGAGT TCGGCTACGA GGCGATGTCG TTGCGGCAGA TCACGGCGCG CGCCAAGGTC
AACCTGGCCG CCGTCAACTA TCACTTCGGC AGCAAGGAAG CGCTGATGCA GTCGGTGCTC
GGCCGCCGGC TCGACCCGCT CAACACGCGC CGGCTGGCGC TGCTGACCGC GTGCGAGGAG
CGCTGGCCGC AGCGGCTGAG CTGCGAGCAT GTGCTGGGCG CGCTGTTCGT GCCCGCGCTG
CAGATGGCGC GCACCCCCGA CACCGGCGGC CCCGCCTTCC TGCGGCTGAT GGGCCGCGTG
TATTCCGATA CGTCGCCGTT CGTGCAGAAC TATCTGCTCG GCCACTACGC GCCCGTCTTC
GACCGCTTCT TCGAAGCGTT CTCGCGCACG CTGCCGGGCC TTCCCCGCGC CGAGCTCGGC
TGGCGGCTGC ATTTCGCGCT CAAGGCGCTG GCCGGCGTGC TGGCCGGCGA TGACCTCAAC
AACCTGCTGC CGCTGTTCAC GCAGGGCAAG CCGATGAACG ATGCGACCCT GCTGGCGCGC
CTGACCGCGC TGGTGGTGGC CACGCTCAAC GCGCCGCTGC CGGGCGACGA GGCGGGCGCG
CTGGACCAGG TGGTGGAACT GGCCGAGGTC CAGCCCCCCG CATCCACGGC GCCGGCGGAC
GACGATTCCA CCGGCAACGG GGGCGGCGGC GCGGACCGAG GCACCGAGCG CGCCGGCAGC
CCGCCGCATG CCGCACCCTT CTCCGGCGAC CCGTTCGGCC GGACCGCGGC ATCGCGCGCC
GACGCCGGGG CCGCACGCAA CGACACAGCC GACGACGACA GCGACAACGT GGATGGCAGC
AGCACCGCGC CGCAGGCCAC ACCCTCCGCG CGGACCCGTG CCCTGGCGAT CCGCCGCAGC
AACGCGGCCC GCGCCATCTT CCCGGCCAAT CCGATGCGGC CCTGGCGCAG CCCCGGCGCC
TGA
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| Protein sequence | MARPGAGDTK NRILEATELL FIEFGYEAMS LRQITARAKV NLAAVNYHFG SKEALMQSVL
GRRLDPLNTR RLALLTACEE RWPQRLSCEH VLGALFVPAL QMARTPDTGG PAFLRLMGRV
YSDTSPFVQN YLLGHYAPVF DRFFEAFSRT LPGLPRAELG WRLHFALKAL AGVLAGDDLN
NLLPLFTQGK PMNDATLLAR LTALVVATLN APLPGDEAGA LDQVVELAEV QPPASTAPAD
DDSTGNGGGG ADRGTERAGS PPHAAPFSGD PFGRTAASRA DAGAARNDTA DDDSDNVDGS
STAPQATPSA RTRALAIRRS NAARAIFPAN PMRPWRSPGA
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