| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0537 |
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| Symbol | fadE |
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| ID | 1219341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 578091 |
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| End bp | 580598 |
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| Gene Length | 2508 bp |
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| Protein Length | 835 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637236895 |
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| Product | acyl-CoA dehydrogenase |
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| Protein accession | NP_518658 |
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| Protein GI | 17545256 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0153828 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.335632 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATCT GGATCGGCCT GCTCTGCATC GGCGCGCTCG GGCTCGCCAG CATGGAAGCC
CCGGCGCTGG CGTGGCTGGC GGGCACGGCC GCCTGGCTCG CGGCCGGCGC GTGGCTCGGC
CTGGCGGGCC CGGTGGCGAC TGCCGTGCTG GCCGTTGTGC TGGTGCTGCC CGCCCTGCTG
CTCACGCTCA AGCCGCTGCG CCGCGCGCTG GTCACGCGGC CGGTACTGGC GACGTTCCGC
GCGATCCTGC CGGAGATGTC GCAAACCGAG CGCGACGCCA TCGAAGCCGG CACGGTGTGG
TGGGATGCCG AACTGTTCTC CGGCCGCCCC GACTGGAAAC GGCTGCGCGC GGCCCCGGCG
CCACGGCTGA CGCCGGAGGA GCAAGCCTTC CTCGACATCG AGACCGGGAA GCTGTGCGAC
CTCGCCAACG ACTGGGAGAG CACGCAGGTC TGGCAGGACC TGTCGCCCGA AGCGTGGGCC
TATGTCAAGC AGGCCGGCTT CCTCGGCATG ATCATCCCCA GGGAATACGG CGGCAAAGGG
TTCTCGGCCT ATGCGCACTC GCAGGTGGTG ATGAAGCTGG CGACGCGCTG TTCGGCGGCG
GCGGTGTCGG TGATGGTGCC GAACTCGCTG GGCCCGGCCG AGCTGCTGCT GCACTACGGC
ACCGACGCGC AGAAGGCCTA CTACCTGCCG CGCCTGGCGC GCGGCGAGGA GATCCCCTGC
TTCGCGCTGA CCAACGCCTA CGCCGGCTCG GACGCCGCCG CCATCCCCGA TGTGGGCGTG
GTCTGCCGCG GCCTGCACGA GGGCCGCGAG ACGCTCGGCC TGCGCGTGAC CTGGAGCAAG
CGCTATATCA CGCTCGGGCC GATCGCGACG GTGCTGGGGC TGGCCTTCCG CGTGGTCGAT
CCGGACGGCC TGCTGGGCGA CGACAAGGCG CCCGGCATCA CCTGCGCGCT GATCCCGACG
CGGCATCCGG GCGTCAACAT CGGCCGCCGC CACTGGCCGC TCAACGCGGT GTTCCAGAAC
GGCCCGAACT GGGGCAAGGA TGTGTTCATC CCGATCGACT GGGTGATCGG CGGGCAGGCG
CAGGTGGGGC GCGGCTGGCG CATGCTGATG GAATGCCTGG CGGCGGGCCG CGCGATCTCG
CTGCCGTCGT CCAACGTCGG GATGGCCAAG CTGGCGGTGC GCGCGACCGG CGCCTATGCC
GCCGTGCGCC GGCAGTTCCG CACGCCCATC GGGCAGTTCG AGGGCATCCG GGAGGCGCTG
GGCCGCATGG GCGGCAACCT CTACACGATG GATGCGGCGC GCCGGCTGTC GGCGCTGGCG
GTGGACCTGG GCGAGAAGCC GTCGGTCATC TCCGCCATGG CCAAGTACCA CGTCACCGAG
CGCGCCCGCG ACGTGATCAA CGATGCCATG GACATCGTCG GCGGCAAGGG CATCTGCATG
GGGCCGAACA ACTTCCTGGC GCGCGCGTAC CAGCAGATTC CGATCGCCAT CACGGTGGAG
GGCGCCAACA TCATGACGCG CTGCCTGATC ATCTTCGGCC AGGGCGTGAT CCGCTGCCAC
CCGTACGTGC TGCGCGAGAT GACGGCCGCG CAAGGCGCCG ATTCGCCCGC GAGCCTGCGC
GCCTTCGACG CGGCGCTGTT CGGCCACGGC GCCTTCGTCG CCGGCAACCT GGTGCGTGCG
CTGCTGCATG CGCTGTCGGG CGGGCGCGCG ACGGCGGCGC CATCGGATGC CGCGCCGGCG
CTGCGCCGCT ACTACCGGGC CGTCAACCGC TTCTCGACCG CGCTGGCGCT GCTGGCCGAT
GTGTCGATGT TCACGCTGGG CGGCACGCTC AAGCGCCGCG AGAGCCTCAC CGGACGGCTG
GGCGACATCC TCTCGCAGCT GTACCTGGTG AGCGCCGTGC TCAAGCGCTT TGAAGACGAC
GGCCGGCCAG CCGACGATGC GGCGCTGGCG CACTGGTCGG CGCAGGACGC GCTGGCCCGC
GCCTACGACG CGCTCGACGG CGTCCTGGCG AACTTCCCGA ACCGCGCCGT GGCCGGCGTG
CTGCGCATGC TGACCTTCCC GTTCGGCTCG CCGTATCGCC GGCCGGCGGA TGCGCTGTCG
GCGCGGATCG CCGAGCTGGT GCAGACGCCG GGCGCGACGC GCGATCGCCT GGTCGCCGAT
TCATACTGCC CGGCGCCCGA GACTGACCCG ATCGCCTACG GAGAAGCCGC CTTCCGCTTG
CAGCCGGCGG TCGATGCGAT CGAGCGGCGC TTGAAACCCG CCATCCGCGC GGGCAAGCTT
GCGCCCGTGC CGCAGAGCCT GCCCGAGTTC GAAGCGTGGA CCGCGCAGGC CCTGGCGCAA
CACCTGATCG ACGAGGAAGA GCGCGCCCGC CTCTGCGACT ATGCCCGCTA TGGCGAGCAC
GCCGTCGCCG TGGACGACTT CCCGCCCGAC TTCAACCTGC TGGCCGACCT GCAGCGCCGC
AAGGCCGCGC TGGAGGCCCT GCAAGCGGCC GGGCAGCATG CCGCCTGA
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| Protein sequence | MTIWIGLLCI GALGLASMEA PALAWLAGTA AWLAAGAWLG LAGPVATAVL AVVLVLPALL
LTLKPLRRAL VTRPVLATFR AILPEMSQTE RDAIEAGTVW WDAELFSGRP DWKRLRAAPA
PRLTPEEQAF LDIETGKLCD LANDWESTQV WQDLSPEAWA YVKQAGFLGM IIPREYGGKG
FSAYAHSQVV MKLATRCSAA AVSVMVPNSL GPAELLLHYG TDAQKAYYLP RLARGEEIPC
FALTNAYAGS DAAAIPDVGV VCRGLHEGRE TLGLRVTWSK RYITLGPIAT VLGLAFRVVD
PDGLLGDDKA PGITCALIPT RHPGVNIGRR HWPLNAVFQN GPNWGKDVFI PIDWVIGGQA
QVGRGWRMLM ECLAAGRAIS LPSSNVGMAK LAVRATGAYA AVRRQFRTPI GQFEGIREAL
GRMGGNLYTM DAARRLSALA VDLGEKPSVI SAMAKYHVTE RARDVINDAM DIVGGKGICM
GPNNFLARAY QQIPIAITVE GANIMTRCLI IFGQGVIRCH PYVLREMTAA QGADSPASLR
AFDAALFGHG AFVAGNLVRA LLHALSGGRA TAAPSDAAPA LRRYYRAVNR FSTALALLAD
VSMFTLGGTL KRRESLTGRL GDILSQLYLV SAVLKRFEDD GRPADDAALA HWSAQDALAR
AYDALDGVLA NFPNRAVAGV LRMLTFPFGS PYRRPADALS ARIAELVQTP GATRDRLVAD
SYCPAPETDP IAYGEAAFRL QPAVDAIERR LKPAIRAGKL APVPQSLPEF EAWTAQALAQ
HLIDEEERAR LCDYARYGEH AVAVDDFPPD FNLLADLQRR KAALEALQAA GQHAA
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