| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0517 |
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| Symbol | pdxA |
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| ID | 1219321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 555147 |
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| End bp | 556163 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637236875 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | NP_518638 |
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| Protein GI | 17545236 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.406958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0148429 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAACA TTGCCATCAC GACCGGCGAA CCGGCCGGCA TCGGTCCGGA CATCACCGTG
ACGGCGCTGC TGCGCCTGCT GCGGCAGCCC GCCCCGCGCC ATGCCGACGT GCGCTGGCAC
GTGATCGGCG ATGCCGCGCT GCTGCAGGCG CGCGCCGATG CCATCGGCCT GGGCGACGCC
TGGCGGGACG CAGCGGCGGC GCTCACCGTG GTCGCGCGTC CGCTGGGGGC GCCGGTGCGC
ACCGGCGTGC TCGATGCCGC CAATGGCCGC TATGTGCTCG ACCTGCTCGA TGCCGCCATC
GACGGCTGCC TGCCAGATGC CGCGGGCATG GCGCGCTACG ACGCGATGGT GACGGCCCCG
GTGCAGAAGA GCACCATCAA CGACGCCGGC GTGCCGTTCA CCGGCCATAC CGAATACCTG
GCCGAGCGCA GCCGCACGCC GCGCGTGGTG ATGATGCTGG CCGGCCCGCA GCCCGCGCAT
GGCAACGCCA TGCTGCGCGT GGCGCTGGCC ACCACGCACC TGCCGCTGCG CGAGGTGCCG
GATGCCATCA CGCCCGCCGT GCTGGACGAG ACGCTGGACA TCGTGCAGCG GGACCTGCGC
GCCCGCTTCG GCATGGCCGC GCCTCGCATC CTGGTCACCG GGCTGAATCC GCATGCCGGC
GAGGCGGGCC ACCTGGGCCG CGAGGAGATC GAGGTGATCG AACCCGCCGT TGTCCGGGCC
CGTGCGCGCG GCATCGACGC CCGCGGGCCG TATCCCGCCG ACACGCTGTT CCAGCCGCGC
CTGCTGGCCG ATGCCGATTG CGTGCTGGCG ATGTATCACG ACCAGGGCCT GGCGCCGCTC
AAGTACGGCA CCTTCGGCCA TGGCGTCAAC ATCACGCTGG GGTTGCCGTT CGTGCGCACC
TCCGTCGACC ACGGCACCGC GCTGGATCTT GCCGGCACCG GCCGCGCGGA GGCGGGCAGC
CTGCTCGAGG CGATCGATAC CGCTGTCGAG ATGGCCCGCC ACGCGGCGCA TTCCTGA
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| Protein sequence | MLNIAITTGE PAGIGPDITV TALLRLLRQP APRHADVRWH VIGDAALLQA RADAIGLGDA
WRDAAAALTV VARPLGAPVR TGVLDAANGR YVLDLLDAAI DGCLPDAAGM ARYDAMVTAP
VQKSTINDAG VPFTGHTEYL AERSRTPRVV MMLAGPQPAH GNAMLRVALA TTHLPLREVP
DAITPAVLDE TLDIVQRDLR ARFGMAAPRI LVTGLNPHAG EAGHLGREEI EVIEPAVVRA
RARGIDARGP YPADTLFQPR LLADADCVLA MYHDQGLAPL KYGTFGHGVN ITLGLPFVRT
SVDHGTALDL AGTGRAEAGS LLEAIDTAVE MARHAAHS
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