| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0510 |
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| Symbol | |
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| ID | 1219314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 546019 |
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| End bp | 548124 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637236868 |
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| Product | hypothetical protein |
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| Protein accession | NP_518631 |
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| Protein GI | 17545229 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0522945 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGCCG GCAGCTACCA CCCCCTTCTT GTCCTGTTCT CACTGTGCGT GGCGATCCTG
GCGTCGTACA CGGCGCTGGA CATGGCCGGC CGCATCGCCA TGGCGCGCGG GCGCGCCGCG
CAGTGGTGGC TCGCCGGCGG CGCCTGCGCC ATGGGGCTGG GCATCTGGTC GATGCATTTC
GTGGGCATGC TGGCCTTCCG CCTGCCGATT CCGCTCGGCT ATGACACGTG GATCACCCTG
GCCTCGCTGC TGATCGCCAT CGCCCTGTCG GCTTTTGCGC TGTGGCTGGT CTGCCAGCGC
CGGCTGCCCT GGCCGCGGCT GGCCGGCGGC GCGCTGCTGA TGGGCGCGGG CGTGGCCAGC
ATGCATTACA CCGGCATGGC GGCCATGCGC ATGTCGCCGG GGATCCTCTA CGATCCGGCC
CTCTTCTGCC TGTCGGTGGT CATCGCCATG CTGGCGTCGG GCGCGGCGCT GTGGATCGCG
TTCCGCCTGC GGCGCCAGTC GCGCCGCAGG CGGGCGATGC GCGCCGGCGC CGCGGTGGTG
ATGGGCCTGG CCATCGTCGG CATGCACTAC ACCGGCATGG CGGCGGCCGG CTTCCCGCTG
GGCAGCATTT GCGGTGCGGC GCGCGGCGGC GCCAGCGCCG AATGGTTGGC CCTGGTCATC
ATCGTGGTGA CGCTCGCGGT GCTGGCGATG GCGCTGCTCA TTTCGGTGTT GGACCTGCGC
ATGGAGGCGC GCACGGCGGT GCTGGCGACG TCGCTGGCCA AGGCCAACCG CGAGCTGGCC
TACCTGGCGC TGCACGACAG CCTGACCAAG CTGTCCAACC GCCTGCTGCT CGAAGACCGC
CTGGACCAGG CGATCCAGGC GGCCGGCAGC AATCGCGGCA GCTTCGCGCT GATGTTCCTC
GACCTGGACG GCTTCAAGGC AATCAACGAC GTCTATGGCC ATCACGCGGG CGATCTGCTG
CTGGCCGACG TGGCGCGGCG CATCGTGGCG TGCGTGCGCC AGCAGGACAC GGTGGCGCGG
GTCGGCGGCG ACGAGTTCGT CGTGCTGGCC GGCGTGGGCG AGCCCGCGGA CGCCGGGACC
CTGGCCGACG CCCTGCTGGC CGCCGTGCGC GCGCCGTTCC TGGTGGACGG GCACGCACTG
CGGGTGTCGA CCAGCATCGG CATCGCGCTC TATCCGGACG ACGGCGCCGG CCAGCACGAT
CTGCTCACCA ATGCCGACGC GGCGATGTAT CACGCCAAGG GCATGGGCCG CGATACGTAC
TGCTTCTTCG AGGCGTCGAT GAACACCAAC GTCCATCAGC AGCTGCAGCT GGTGCAGGAC
CTGCGCCTGG CGCTGGAGCG GCACGAGCTG GTGCTGCACT ACCAGCCCAA GTTCAGCGCG
CCGCATGGCC CCGTGGTCGG GGTCGAGGCG CTGGTGCGCT GGCAGCATCC CGAGCGCGGG
CTGGTGCAGC CCGATGCCTT CATTCCGCTG GCGGAGAAGA CCGGCCTGAT CGTGCCGCTC
GGGGCCTGGG TGCTCGACGA GGCGTGCCGG CAGATGGCGC AATGGCGCCG GGAAGGGCAC
GCGCAATGGT CCATCGCCGT CAACCTTTCG GCGGTGCAGT TCGCCCATGC GGCGCTGGTC
GACACCGTGC GCGACACGCT TGCCCGCCAT GCGCTGGAGC CGCAAGGCCT GACGCTGGAG
ATCACCGAAT CGACCGCGAT GCGCGACGCC GACGCCAGCC TGCACATCCT GCAGCAGCTG
CATGCGATGG GCGTGCGCAT CTCGATCGAC GATTTCGGCA CCGGCTATTC GAGCCTGCTG
TATCTGAAGC GCCTGCCGGC CAGCGAACTG AAGATCGATC GCGGGTTCGT GCGCGACCTG
GCGCACGACT CCGAGGATGC GGCCATCGTC TCGGCCGTCG TGGCGCTGGG CCAGACCCTG
AACCTGCGCA TCGTGGCCGA AGGCGTGGAG ACCGAGGCGC AGCAGGCGTT CCTGACGCGC
CTCGGTTGCC ATGCTCTGCA GGGCAACCTG CTGGGCCGGC CGATGACGGC GCAGGCGGTG
CTCGAGGCCG CCGGGCTGGC GCAGGCGCAG GGCCTCCAGG CGATGGCGGC CGAAGCGCGG
GCCTAG
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| Protein sequence | MLAGSYHPLL VLFSLCVAIL ASYTALDMAG RIAMARGRAA QWWLAGGACA MGLGIWSMHF
VGMLAFRLPI PLGYDTWITL ASLLIAIALS AFALWLVCQR RLPWPRLAGG ALLMGAGVAS
MHYTGMAAMR MSPGILYDPA LFCLSVVIAM LASGAALWIA FRLRRQSRRR RAMRAGAAVV
MGLAIVGMHY TGMAAAGFPL GSICGAARGG ASAEWLALVI IVVTLAVLAM ALLISVLDLR
MEARTAVLAT SLAKANRELA YLALHDSLTK LSNRLLLEDR LDQAIQAAGS NRGSFALMFL
DLDGFKAIND VYGHHAGDLL LADVARRIVA CVRQQDTVAR VGGDEFVVLA GVGEPADAGT
LADALLAAVR APFLVDGHAL RVSTSIGIAL YPDDGAGQHD LLTNADAAMY HAKGMGRDTY
CFFEASMNTN VHQQLQLVQD LRLALERHEL VLHYQPKFSA PHGPVVGVEA LVRWQHPERG
LVQPDAFIPL AEKTGLIVPL GAWVLDEACR QMAQWRREGH AQWSIAVNLS AVQFAHAALV
DTVRDTLARH ALEPQGLTLE ITESTAMRDA DASLHILQQL HAMGVRISID DFGTGYSSLL
YLKRLPASEL KIDRGFVRDL AHDSEDAAIV SAVVALGQTL NLRIVAEGVE TEAQQAFLTR
LGCHALQGNL LGRPMTAQAV LEAAGLAQAQ GLQAMAAEAR A
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