| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0506 |
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| Symbol | |
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| ID | 1219310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 539781 |
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| End bp | 540851 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637236864 |
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| Product | NIFR3-like protein |
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| Protein accession | NP_518627 |
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| Protein GI | 17545225 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.973131 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.138015 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAGATCG GACCGCATAT CCTGCGCAAC AACCTGTTCG TCGCCCCCAT GGCGGGCGTG
ACGGACCGCC CGTTCCGCCA GCTGTGCAAG CGGCTGGGCG CCGGCTATGC GGTCTCGGAG
ATGGTGGCGT CCAACGCGCA GCTGTGGAAG AGCGAGAGGA CCATGCGCCG CGCCAACCAC
ACCGGCGAGG TCGAGCCGAT CGCCGTGCAG ATCGCCGGCG CCGAGCCGAT GATGATGGCC
GAGGCCGCGC GCTACAACGT CGAGCGCGGC GCGCAGATCA TCGACATCAA CATGGGCTGC
CCGGCCAAGA AGGTGTGCAA CGTGGCGGCC GGCTCGGCCC TGCTGCAGAA CGAGCCGCTG
GTGGCGCGCA TCGTCGAGGC GGTGGTCGGC GCGGTGGGCG ACCGCGTGCC GGTCACGCTC
AAGATCCGCA CCGGCTGGGA CCGCGAGCAC CGCAACGCGC TGACGGTCGC GCGCATCGCG
CAGGAAGCCG GCATCAGCAT GCTGACCGTG CACGGCCGCA CCCGCGCCGA CTTGTACCAC
GGCGAGGCCG AGTACGAGAC CATCGCCGCG GTCAAGGCCT CGGTGCGCAT CCCGGTGGTC
GCCAACGGCG ACATCGGCAC GCCGGCCAAG GCCCGGCACG TGCTGGAGGT GACCGGCGCC
GACGCCATCA TGATCGGCCG CGCCGCCCAG GGGCGCCCGT GGCTGTTCCG CGAGATCGAG
CACTTCCTGA AGACCGGCAC GCTGCTGCCG GCGCCGGAGG TCGAAGAGAT CCGCGGCATC
ATGAACACGC ACCTGGAAGA GCATTACGCG TTCTACGGCG AGTACACCGG CGTGCGCACC
GCGCGCAAGC ACATCGCCTG GTACACGCGG GGGCTGGCGG GCGCCAACCT GTTCCGCCAC
CGCATGAACA CCATCGAAGA CACCGCGGCC CAGCTGGCCG CCGTCAATGC CTTCTTCGAC
GAGCAGCGCG CGCTGTCCGA CCGCCTGGTC TACACGGACC AGGACGATGC CGCGGGCGGC
CCTCCCACGA CGGGCAACAA CAACGACAAC AAGGAACTGC TTGCCGCATG A
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| Protein sequence | MQIGPHILRN NLFVAPMAGV TDRPFRQLCK RLGAGYAVSE MVASNAQLWK SERTMRRANH
TGEVEPIAVQ IAGAEPMMMA EAARYNVERG AQIIDINMGC PAKKVCNVAA GSALLQNEPL
VARIVEAVVG AVGDRVPVTL KIRTGWDREH RNALTVARIA QEAGISMLTV HGRTRADLYH
GEAEYETIAA VKASVRIPVV ANGDIGTPAK ARHVLEVTGA DAIMIGRAAQ GRPWLFREIE
HFLKTGTLLP APEVEEIRGI MNTHLEEHYA FYGEYTGVRT ARKHIAWYTR GLAGANLFRH
RMNTIEDTAA QLAAVNAFFD EQRALSDRLV YTDQDDAAGG PPTTGNNNDN KELLAA
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