Gene RSc0496 details

Gene Information

• Locus tag: RSc0496
• Symbol: tyrS
• ID: 1219300
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003295
• Strand: +
• Start bp: 531680
• End bp: 532858
• Gene Length: 1179 bp
• Protein Length: 392 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637236854
• Product: tyrosyl-tRNA synthetase
• Protein accession: NP_518617
• Protein GI: 17545215
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0162] Tyrosyl-tRNA synthetase
• TIGRFAM ID: [TIGR00234] tyrosyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.182891
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 12
• Fosmid unclonability p-value: 0.219144
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGAGGTCA CGCAGCGCGG CTGCGACGAA CTGCTGATCG CTGCGGAGTG GGAGCAGAAG 
CTGGCCCGCA GCGCCGCCAC CGGCGTGCCG CTGCGCATCA AGCTGGGCCT GGACCCGACC 
GCGCCAGACA TCCACATCGG CCACACCGTG GTGCTCAACA AGATGCGCCA GCTGCAGGAC 
CTGGGGCACC AGGTGATCTT CCTGATCGGC GATTTCACCT CGACCATCGG CGATCCGTCG 
GGCCGCAACG CCACGCGCCC GCCGCTCACG CGCGAGCAGA TCGAGGCCAA CGCGCAGACC 
TACTACCGCC AGGCCAGCAT GGTGCTGGAC CCGAGCAAGA CCGAGATCCG CTACAACAGC 
GAGTGGTGCG ATCCGCTGGG CGCGCGCGGC ATCATCCAGC TCGCCGCCAA GTACACCGTG 
GCCCGCATGA TGGAGCGCGA CGACTTCACC AAGCGCTACA AGGCGGGCGT GCCGATCTCG 
GTGCACGAAT TCCTCTACCC GCTGATGCAG GGCTATGACT CGGTGGCGCT GAAGTCCGAC 
CTGGAGCTCG GTGGGACCGA CCAGAAATTC AACCTGCTGG TCGGCCGTGA GCTGCAGAAG 
GAATACGGCC AGGAGCCGCA GTGCATCTTG ACGATGCCGC TGCTGGTCGG CCTGGACGGC 
GTGGAGAAGA TGTCCAAGTC CAAGGGCAAC TACGTCGGCA TCAGCGAGGC GCCCAACGAG 
ATGTTCGGCA AGCTGATGAG CATCTCCGAC GACCTGATGT GGACGTACTA CACGCTGCTG 
TCGTTCCGTC CGCTGGCCGA GATCGACCTG ATGAAGCAGG AAGTGACGCT GGGCCGCAAC 
CCGCGCGACT GCAAGGTGCT GCTGGCGCAA GAAATCATCG CGCGCTTCCA CAGCCAGGCC 
GATGCCGAGC GCGCGCTGGA GGACTTCAAC CACCGCGCGC GCGGCGGCGT GCCGGACGAC 
ATTCCGCAGA TCGAGCTGTC GGGCGCGCCG ATCGGCATCG CGCAACTGCT CAAGCAGGCC 
GGCCTGTGCC CGTCCACCTC GGAAGCCAAC CGCAATATCG AGCAGGGCGG GGTGAAGATC 
GACGGCACCG TCATCAGCGA CAAGGGGCTG AAGGTCGAGG CCGGCACCTT TGTGATGCAG 
GTGGGCAAGC GGCGCTTTGC GCGCGTGGTG CTGTCGTGA 

 

Protein sequence

MEVTQRGCDE LLIAAEWEQK LARSAATGVP LRIKLGLDPT APDIHIGHTV VLNKMRQLQD 
LGHQVIFLIG DFTSTIGDPS GRNATRPPLT REQIEANAQT YYRQASMVLD PSKTEIRYNS 
EWCDPLGARG IIQLAAKYTV ARMMERDDFT KRYKAGVPIS VHEFLYPLMQ GYDSVALKSD 
LELGGTDQKF NLLVGRELQK EYGQEPQCIL TMPLLVGLDG VEKMSKSKGN YVGISEAPNE 
MFGKLMSISD DLMWTYYTLL SFRPLAEIDL MKQEVTLGRN PRDCKVLLAQ EIIARFHSQA 
DAERALEDFN HRARGGVPDD IPQIELSGAP IGIAQLLKQA GLCPSTSEAN RNIEQGGVKI 
DGTVISDKGL KVEAGTFVMQ VGKRRFARVV LS