Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0493 |
Symbol | |
ID | 1219297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 529281 |
End bp | 529685 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637236851 |
Product | hypothetical protein |
Protein accession | NP_518614 |
Protein GI | 17545212 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1664] Integral membrane protein CcmA involved in cell shape determination |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.194151 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGTTTG GCAAAAAGAA AGGGCTGGCG ATCGAAACCC TGCTGGGCGC GCGTACGCGG CTGGAAGGGG AACTGCGCTT TTCGGGCGGT CTGCGCATCG ACGGGCAGAT CAAGGGCAAC GTGATCGGCG ATCCCGACAA GCCCAGCATG CTGGTGGTGA CCGACAGCGC GCGCATCGAG GGCGAAGTGC ATGTCGGGCA CCTGATTCTC AACGGCACGG TCGTGGGGCC GGTGCATGTC TCGGAGTTGC TGGAGCTGCA GCCCAAGGCG CGCATCGAGG GCAATGTGCA ATACGCTGCG CTGGAAATGC ATCAGGGTGC CGTTGTCATG GGCACGCTGA CGCATTCCAC ACCCGGTGAT GTGAAGCTGC TGCCCAACCT GAAGCTGGCC TCCAACCAGG ACTGA
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Protein sequence | MLFGKKKGLA IETLLGARTR LEGELRFSGG LRIDGQIKGN VIGDPDKPSM LVVTDSARIE GEVHVGHLIL NGTVVGPVHV SELLELQPKA RIEGNVQYAA LEMHQGAVVM GTLTHSTPGD VKLLPNLKLA SNQD
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