| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0490 |
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| Symbol | rplM |
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| ID | 1219294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 527431 |
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| End bp | 527859 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637236848 |
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| Product | 50S ribosomal protein L13 |
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| Protein accession | NP_518611 |
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| Protein GI | 17545209 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0102] Ribosomal protein L13 |
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| TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000324279 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.194151 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGACCT TTTCCGCGAA GCCCCATGAG GTGAAGCGCA ATTGGTTCGT GATTGACGCG
ACGGACAAGG TCCTCGGGCG TGTCGCCAGC GAAGTGGCAC TCCGACTGCG CGGCAAGCAC
AAACCCGAAT TCACTCCGCA CGTCGACACG GGCGATTTCA TCATCGTGAT CAACGCAGCC
AAGCTGCGTG TGACGGGCGC CAAGACGACC GACAAGAAGT ACTATCGCCA CTCGGGCTAC
CCGGGCGGTA TCTACGAAAC GACGTTCGGC AAGATGCAGC AGCGTTTCCC GGGCCGCGCC
CTGGAAAAAG CCGTGAAGGG CATGCTGCCG AAGGGTCCGC TGGGCTACGC GATGATCAAG
AAGCTGAAGG TGTACGCCGA AGGCTCGCAT CCGCACGAAG CTCAGCAGCC GCAAGTGCTG
GAAATCTAA
|
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| Protein sequence | MKTFSAKPHE VKRNWFVIDA TDKVLGRVAS EVALRLRGKH KPEFTPHVDT GDFIIVINAA
KLRVTGAKTT DKKYYRHSGY PGGIYETTFG KMQQRFPGRA LEKAVKGMLP KGPLGYAMIK
KLKVYAEGSH PHEAQQPQVL EI
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