| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0482 |
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| Symbol | gltJ |
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| ID | 1219286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 518429 |
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| End bp | 519157 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637236840 |
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| Product | glutamate/aspartate transmembrane ABC transporter protein |
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| Protein accession | NP_518603 |
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| Protein GI | 17545201 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.441465 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATTACC ACTGGAACTG GGGCGTCTTC TTCACCGAAG CCGCGCAGAA TCAGACCTAC
CTTGACTGGC TGCTTTCGGG GTTGAAGACC ACGATCGCGC TGGGCCTGTC CTCCTGGATC
ATCGCGCTCG TCCTTGGCTC CGTGCTGGGC GTGCTGCGCA CCGTGCCCAG CAAGGCGCTG
TCGGGCCTTG CCACGGCCTA CGTGGAGCTG TTCCGCAACA TCCCGCTGAT CGTGCAGCTG
TTCATCTGGT ATTTCGTCAT GCCGGAACTG GTGCCGGGCG GCGACTACAT CAAGCAGATG
AACCCCGCCA CGGCGATGTT CCTGTGCGCG ATGCTGTGCC TCGGTACTTT TACCGCGGCG
CGGGTGTGCG AACAGGTGCG CTCGGGCATC AACTCGCTGC CGCGCGGCCA GCGCAACGCC
GGCCTGGCGA TGGGCTTCAC GCTGGCGCAG ACGTACCGCC ACGTCATGCT GCCGATGGCG
TTCCGCATCA TCGTGCCGCC GCTCACCTCC GAGTTCCTGA ACATCTTCAA GAACTCCGCG
GTGGCGTCGA CCATCGGTCT GCTGGAGCTC GCGGCACAGG GGCGCCAACT GGTGGACTAC
ACCGCGCAGC CCTACGAGTC GTTCATCGCC GTGACACTGA TGTACATGCT GATCAACCTG
ACCGTCATGG GAATCATGCG CTGGGTTGAA GCACGTACCC GGCTGCCCGG TTTCATCGGC
GGCAAGTAA
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| Protein sequence | MNYHWNWGVF FTEAAQNQTY LDWLLSGLKT TIALGLSSWI IALVLGSVLG VLRTVPSKAL
SGLATAYVEL FRNIPLIVQL FIWYFVMPEL VPGGDYIKQM NPATAMFLCA MLCLGTFTAA
RVCEQVRSGI NSLPRGQRNA GLAMGFTLAQ TYRHVMLPMA FRIIVPPLTS EFLNIFKNSA
VASTIGLLEL AAQGRQLVDY TAQPYESFIA VTLMYMLINL TVMGIMRWVE ARTRLPGFIG
GK
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