| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0481 |
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| Symbol | |
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| ID | 1219285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 517388 |
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| End bp | 518329 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637236839 |
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| Product | amino-acid-binding periplasmic (PBP) ABC transporter protein |
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| Protein accession | NP_518602 |
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| Protein GI | 17545200 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.43988 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGTACATT CCCGTTTTCT CTTTCATGGT CAAAAGGAGA CCTTCATGAA CCTCGCCAAG
CTGGCAACCG TGCTTGCTGC CATTGGTGTG TTGAGCAGCG CTGCGCACGC GCAGGAGCTG
ACTGGTACGC TGAAGAAGAT CAAGGACACC GGCACCATCA CGCTGGGCGT GCGCGATTCG
TCGATTCCGT TCAGCTACAA CGTCGGCGGG GTCCGGACGA TCGGCTACTC GTATGACGTC
GCCACCAAGG TCGTCGAGGC TGTGAAGGAG CAGCTCAAGC TGAAGGACCT GCAGGTCAAG
GAGATCCCGG TCACGTCGCA GAACCGCATC ACGCTGCTGC AGAACGGCAC GATCGACCTC
GAATGCGGCT CCACCACCAA TAATCTCGAG CGCCAGAAGC AGGCGTCGTT CACCAACACC
ATCTTCATCA TCGGCACGCG CATGATGGTG AAGAAGGATT CCGGCATCAA GGACTGGGTC
GACCTGAAGG GCAAGAACGT CGTGACCACC GCGGGCACCA CGTCCGAGCG CCTGCTGCGC
AAGATGAACG ACGAGAAGCA GCTGGGCATG AACATCATCA GCACCAAGGA CCATGGCCAG
TCGTTCCTGA CGCTGGAGTC GGGTCGCGCC GTCGCCTTCA TGATGGACGA CGCCTTGCTG
TACGGCGAGC GCGCCAAGGC CAAGACCCCG GCCGACTGGG TCGTCGTGGG CAAGCCGCAG
TCGCGCGAAG CCTACGGCTG CATGGTGCGC AAGGATGACG CCCCCTTCAA GACGCTGGCC
GACAAGACCA TCGCCGGCAT GATGAAGGAC GGTTCGATCA ACGCCGAGTA CAAGAAGTGG
TTCGAGCAGC CGGTTCCGCC CAAGGGTCTG AACCTGGACT TCCCGCTGTC GGACGACATG
AAGGCGCTGA TCAAGAGCCC GAACGACAAG GCGCTGGACT GA
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| Protein sequence | MVHSRFLFHG QKETFMNLAK LATVLAAIGV LSSAAHAQEL TGTLKKIKDT GTITLGVRDS
SIPFSYNVGG VRTIGYSYDV ATKVVEAVKE QLKLKDLQVK EIPVTSQNRI TLLQNGTIDL
ECGSTTNNLE RQKQASFTNT IFIIGTRMMV KKDSGIKDWV DLKGKNVVTT AGTTSERLLR
KMNDEKQLGM NIISTKDHGQ SFLTLESGRA VAFMMDDALL YGERAKAKTP ADWVVVGKPQ
SREAYGCMVR KDDAPFKTLA DKTIAGMMKD GSINAEYKKW FEQPVPPKGL NLDFPLSDDM
KALIKSPNDK ALD
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