Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0477 |
Symbol | |
ID | 1219281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 511928 |
End bp | 512347 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637236835 |
Product | hypothetical protein |
Protein accession | NP_518598 |
Protein GI | 17545196 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1607] Acyl-CoA hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCAGC CCGAACGCCC CGCCGAAACC GTATCGCTGC CCGCCGGCAA GCAGCCCGCC GTCCGCGTCA TGCCGATGCC CGCCGACGCC AATGTCCACG GCGACGTGTT CGGCGGCTGG ATCATGGCGC AGGTGGACAT CGCCGGCTCG ATCCCGGCGG TGGTGCGCGC CAACGGGCGC GTGGCCACGG TGGCGGTCAA CTCGTTCGTC TTCAAGCAGC CCGTCTACGT GGGCGACCTG GTGAGCTTCT ACGCCAGCGT GGTCAAGACC GGCCGCACCT CCATCACGGT GGACGTGGAA GTCTATGCGC AGCGCATGGG CAGCAACGGC CGCCACGAGA CGGTCAAGGT GACCGAGGCC ACCCTCACCT ACGTCGCCAC CGACGCGAGC CGCAAACCGC GCGCGCTGCC GCCGCGCTGA
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Protein sequence | MSQPERPAET VSLPAGKQPA VRVMPMPADA NVHGDVFGGW IMAQVDIAGS IPAVVRANGR VATVAVNSFV FKQPVYVGDL VSFYASVVKT GRTSITVDVE VYAQRMGSNG RHETVKVTEA TLTYVATDAS RKPRALPPR
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