| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0475 |
|---|
| Symbol | |
|---|
| ID | 1219279 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 509786 |
|---|
| End bp | 510985 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637236833 |
|---|
| Product | acetyl-CoA acetyltransferase |
|---|
| Protein accession | NP_518596 |
|---|
| Protein GI | 17545194 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.73599 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGC AACTGCAAGA CGCCTACATC GTCGCCGCCA CCCGTTCCCC GATCGGCAAG
GCGCCCAAGG GCTCGTTCAA GAACCTGCGT CCGGACGACC TGCTGGCGAC CGTGCTCAAG
AGCGCGGTGG CCCAGGTGCC GGACCTGGAC CCGAAGCTGA TCGAAGACGC CATCGTCGGC
TGCGCGATCC CCGAAGCGCA GCAGGGCCTG AACGTGGCGC GCATCGGCGC GCTGCTGGCC
GGCCTGCCCA ACACCGTGGG CGGCGTGACC GTCAACCGCT TCTGCGCCTC GGGCCTGACC
GCCGTGGCCA TGGCCGCCGA CCGCATCCGC GTGGGCGAAT CCGACGTGAT GATCGCCGCC
GGCGTCGAGT CGATGAGCAT GGTGCCGATG ATGGGCAATT CGCCGTCGAT GTCGCCGGAC
ATCTTCACGC GCGACGAGAA CATCGGCATC GCCTACGGCA TGGGCCTGAC CGCCGAGCGC
GTCGCCCAGC AGTGGAAGAT CACGCGCGAT GCGCAGGATG CGTTCTCGCT GGCGTCGCAC
CAGAAGGCAT TGGCCGCGCA GCAGGCCGGC GAGTTCAAGG ACGAGATCAC CCCGATCGAG
ATCATCGAGA AGTTCCCCAA CCTGGGCACC GGCGCGATCG ACCTGAAGAC GCGCACGCTG
TCGCTCGATG AGGGCCCGCG CGCCGACACC TCGCTCGAAG GCCTGGCCAA GCTGCGCGCG
GTGTTCGCCA ACAAGGGCAG CGTGACGGCC GGCAACAGCT CGCAGACCTC GGATGGCTCG
GGCGCGCTGA TCCTGGTGTC GGAGAAGATC CTCAGGCAGT TCAACCTGAC GCCGCTGGCG
CGCTTCGTGT CGTTCGCGGT GCGCGGCGTG CCGCCGGAGA TCATGGGCAT CGGCCCGAAG
GAAGCGATCC CGGCCGCGCT CAGGGCCGCC GGCCTGACGC AGGACCAGCT CGACTGGATC
GAGCTGAACG AAGCGTTCGC CGCGCAGTCG CTGGCGGTCA TCCAGGACCT GGGCCTGGAC
ACCGGCAAGA TCAACCCGCT GGGCGGCGCG ATCGCGCTGG GCCACCCGCT GGGCGCGACC
GGTGCGATCC GCGCGGCCAC GGTCGTGCAC GGCCTGCGCC GCCGCAACCT GAAGTACGGC
ATGGTGACGA TGTGCGTCGG CACCGGCATG GGCGCGGCGG GCATTTTCGA GCGCGTTTGA
|
|---|
| Protein sequence | MTKQLQDAYI VAATRSPIGK APKGSFKNLR PDDLLATVLK SAVAQVPDLD PKLIEDAIVG
CAIPEAQQGL NVARIGALLA GLPNTVGGVT VNRFCASGLT AVAMAADRIR VGESDVMIAA
GVESMSMVPM MGNSPSMSPD IFTRDENIGI AYGMGLTAER VAQQWKITRD AQDAFSLASH
QKALAAQQAG EFKDEITPIE IIEKFPNLGT GAIDLKTRTL SLDEGPRADT SLEGLAKLRA
VFANKGSVTA GNSSQTSDGS GALILVSEKI LRQFNLTPLA RFVSFAVRGV PPEIMGIGPK
EAIPAALRAA GLTQDQLDWI ELNEAFAAQS LAVIQDLGLD TGKINPLGGA IALGHPLGAT
GAIRAATVVH GLRRRNLKYG MVTMCVGTGM GAAGIFERV
|
|---|
| |