Gene RSc0468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0468 
SymbolntpA 
ID1219272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp500135 
End bp500623 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content69% 
IMG OID637236826 
ProductdATP pyrophosphohydrolase 
Protein accessionNP_518589 
Protein GI17545187 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.379603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTTCTCC TGGTCATGCC GCACAAGATT CCCGTTTCCG TCCTCGTCGT CATCCACACG 
CCTGATCTCC AGGTGCTGGT GATGGAGCGG GCGGACCACC CGGGTTTCTG GCAATCCGTC
ACCGGCAGCT GTGACACCCC GGACGAGCTC CTGGCCGAGA CCGCGCGCCG CGAAGTGCTG
GAGGAAACCG GCATCGACAC GATGCAGCAC CGGCTCATCG ACTGGGGCCA TCACATCGAA
TACGAGATCT ACCCGCGTTG GCGCCACCGC TACGCGCCGG GCGTCACGCG CAACACCGAA
CACTGGTTCG GCCTGCTGGT CGGCGGCGAG GTGCCGGTGC GGCTGTCGCC GCGCGAGCAT
CTGCAGGCCG AGTGGCTGCC GTACCGCGAG GCCGCCGCGC GCTGCTTCTC GCGCAGCAAC
GGCGAGGCGA TCCTGCAGCT GCCCGCGCGC CTGGCCGACG CGGCCGCGCT GGCAAAGGAC
CGGGCCTGA
 
Protein sequence
MLLLVMPHKI PVSVLVVIHT PDLQVLVMER ADHPGFWQSV TGSCDTPDEL LAETARREVL 
EETGIDTMQH RLIDWGHHIE YEIYPRWRHR YAPGVTRNTE HWFGLLVGGE VPVRLSPREH
LQAEWLPYRE AAARCFSRSN GEAILQLPAR LADAAALAKD RA