Gene RSc0465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0465 
Symbol 
ID1219269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp496385 
End bp497116 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content66% 
IMG OID637236823 
Producthypothetical protein 
Protein accessionNP_518586 
Protein GI17545184 
COG category[S] Function unknown 
COG ID[COG2928] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGA AAACCAGCGC CCTCAAGACA TGGTTCCTGA CCGGTCTACT GGTGCTCGTC 
CCGCTTGCGA TCACGCTGTG GGTGCTGTCG CTCATCATCG GCACGATGGA CCAGAGCCTG
GCGCTGCTGC CTGCGGCCTG GCAGCCGGAC CGCCTGTTCG GTATGCGTGT TCCCGGGCTG
GGCGCGATCC TGACGCTGCT GTTCATCCTG ATCGTGGGCG TGCTCGCGCA CAACTTCATC
GGCCAGAAGC TGGTGCTGTG GTGGGAGGCG CTGCTGGGGC GCATCCCCGT GGTCGGGCCG
ATCTATTCGA GCGTCAAGCA GGTTTCCGAC ACGCTGCTGT CGTCCAACGG CAATGCGTTC
CGCAAGGCGC TGCTGGTGCA GTATCCGCGT GAAGGCTCGT GGACGATCGC CTTCCTGACC
GGCCGCCCCG GCGGCGACGT GGAGAACCAC CTGCAGGGCG AATATGTCAG CGTCTATGTG
CCGACCACGC CGAACCCGAC GTCCGGCTTC TTCCTGATGA TGCCCAAGGC CGACACCATC
GAGCTGGACA TGACGGTGGA TGCGGCGCTC AAGTACATCG TGTCGATGGG CGTGGTGGCG
CCGGAGTCGC TGCCGCGACG CATGGACCCG CCATCACCCG AATCGGAGGA CCGGTCGCCG
GCCCAGGTGC CGCGCGGCCC CTCGAATCCG CAGGCGCTGC CCGATGGTGG TGGCGCCGTG
TCCGCCCCCT GA
 
Protein sequence
MNKKTSALKT WFLTGLLVLV PLAITLWVLS LIIGTMDQSL ALLPAAWQPD RLFGMRVPGL 
GAILTLLFIL IVGVLAHNFI GQKLVLWWEA LLGRIPVVGP IYSSVKQVSD TLLSSNGNAF
RKALLVQYPR EGSWTIAFLT GRPGGDVENH LQGEYVSVYV PTTPNPTSGF FLMMPKADTI
ELDMTVDAAL KYIVSMGVVA PESLPRRMDP PSPESEDRSP AQVPRGPSNP QALPDGGGAV
SAP