Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0461 |
Symbol | ubiB |
ID | 1219265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 491857 |
End bp | 493434 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637236819 |
Product | putative ubiquinone biosynthesis protein UbiB |
Protein accession | NP_518582 |
Protein GI | 17545180 |
COG category | [R] General function prediction only |
COG ID | [COG0661] Predicted unusual protein kinase |
TIGRFAM ID | [TIGR01982] 2-polyprenylphenol 6-hydroxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCGCT TGTTCCGGCT GTGCAAGATC ATCTTCGTCA TCCTCTATCA CGGGCTGGAT CAGCTTGCGC TGTCGGGCTT CAAGAGCCGG CGCATCCGCG CGCTGGTCTG GGTGCTGACC CTCGGCCGCA GGCAGACACG CCCGCGCGGT GAGCGCCTGC GCCTGGCGCT GGAGCAGCTC GGCCCGATCT TCGTGAAGTT CGGGCAGGTC CTGTCCACGC GTCGCGACCT GCTGCCGCCC GATGTGGCGG ACGAACTGGC CAAGCTGCAG GACCGTGTGC CGCCGTTCGA CCCCAAGATC GCGGCCGCCA TTGTCGAGCG ATCGCTGGGC AAGCCGCTGT CGGCGCTGTT CCATCGCTTC GACCATCATC CGGTGGCCAG CGCCTCGATC GCGCAGGTGC ACTTCGCCAC CCTGCGCGGC GGTCCCGACG ACGGCCGCGA GGTGGCCGTG AAGGTGCTGC GTCCCGGCAT GCTGCCGGTG ATCGACAGCG ATCTCGCGCT GATGCGCGAC GTGGCCACGT GGATGGAGAA GCTGTGGGCG GACGGCAAGC GCCTGAAGCC GCGCGAGGTG GTCGCCGAGT TCGACAAGTA CCTGCACGAC GAACTCGACC TGATGCGCGA GGCCGCCAAC GCCAGCCAGC TGCGCCGCAA CTTCGCCAAG TCCGAGCTGC TGCTGGTGCC CGAGGTGTTC TGGGACTGGT GCACCTCCGA GGTGTTCGTG ATGGAGCGCA TGCACGGCGT GCGCGTCTCG CACGCCGACG AACTGCGTGC GGCCGGCGTC GACACGCATA AGCTGGCGCG CGACGGCGTG GAGATCTTCT TCACGCAGGT GTTTCGCGAC GGCTTCTTCC ACGCCGACAT GCACCCCGGC AACATCCTGG TGAGCGTGGC GCCCGAGTCC CTGGGCCGCT ATATCGCGCT GGATTTCGGC ATCGTCGGGG CGCTGTCGGA ATTCGACAAG AATTACCTGG CGCAGAATTT CCTGGCCTTC TTCCAGCGCG ATTACCACCG TGTGGCGCTG CTGCATGTCG AATCCGGCTG GGCGCCCGAA GAGACCCGCG TGGAGGAGCT CGAAGGCGCC ATTCGCGCCT GCTGCGAGCC GTACTTCGAT CGCCCCCTCG GCGAGATTTC GCTGGGGCTC GTGCTGATGC GGCTGTTCCA GACTTCGCGC CGCTTCAACG TGGAAGTGCA GCCGCAGCTG GTGCTGCTGC AGAAGACGCT GCTCAACGTC GAGGGCCTGG GCCGCCAGCT CGATCCGGAC CTGGATCTGT GGAAGACCGC CAAGCCATTC CTGGAACGCT GGATGCACGA GCAGATCGGC TGGCGCGGCC TGGTTGATCG CCTCAAGATC GAGGCGCCGC AATGGGCCAA CATGCTGCCG GACTTCCCGC GCCTGGCGCA CCAGATCCTG GAGCGCCACG CCCGCGATAA CGGCAGCGCT CAGACCGCCA CGCTGAGCGC GCTGCTGGCC GAGCAGCGCC GCACCAACCG CCTGCTGTCG GCGGCGCTGC TGTTCATCGG CGGCTTTGCG GTCGGCATCA TTGCCACGCA TGTGCTGGCG TGGCTGGCCC GCCACTGA
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Protein sequence | MTRLFRLCKI IFVILYHGLD QLALSGFKSR RIRALVWVLT LGRRQTRPRG ERLRLALEQL GPIFVKFGQV LSTRRDLLPP DVADELAKLQ DRVPPFDPKI AAAIVERSLG KPLSALFHRF DHHPVASASI AQVHFATLRG GPDDGREVAV KVLRPGMLPV IDSDLALMRD VATWMEKLWA DGKRLKPREV VAEFDKYLHD ELDLMREAAN ASQLRRNFAK SELLLVPEVF WDWCTSEVFV MERMHGVRVS HADELRAAGV DTHKLARDGV EIFFTQVFRD GFFHADMHPG NILVSVAPES LGRYIALDFG IVGALSEFDK NYLAQNFLAF FQRDYHRVAL LHVESGWAPE ETRVEELEGA IRACCEPYFD RPLGEISLGL VLMRLFQTSR RFNVEVQPQL VLLQKTLLNV EGLGRQLDPD LDLWKTAKPF LERWMHEQIG WRGLVDRLKI EAPQWANMLP DFPRLAHQIL ERHARDNGSA QTATLSALLA EQRRTNRLLS AALLFIGGFA VGIIATHVLA WLARH
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