Gene RSc0461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0461 
SymbolubiB 
ID1219265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp491857 
End bp493434 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content67% 
IMG OID637236819 
Productputative ubiquinone biosynthesis protein UbiB 
Protein accessionNP_518582 
Protein GI17545180 
COG category[R] General function prediction only 
COG ID[COG0661] Predicted unusual protein kinase 
TIGRFAM ID[TIGR01982] 2-polyprenylphenol 6-hydroxylase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGCT TGTTCCGGCT GTGCAAGATC ATCTTCGTCA TCCTCTATCA CGGGCTGGAT 
CAGCTTGCGC TGTCGGGCTT CAAGAGCCGG CGCATCCGCG CGCTGGTCTG GGTGCTGACC
CTCGGCCGCA GGCAGACACG CCCGCGCGGT GAGCGCCTGC GCCTGGCGCT GGAGCAGCTC
GGCCCGATCT TCGTGAAGTT CGGGCAGGTC CTGTCCACGC GTCGCGACCT GCTGCCGCCC
GATGTGGCGG ACGAACTGGC CAAGCTGCAG GACCGTGTGC CGCCGTTCGA CCCCAAGATC
GCGGCCGCCA TTGTCGAGCG ATCGCTGGGC AAGCCGCTGT CGGCGCTGTT CCATCGCTTC
GACCATCATC CGGTGGCCAG CGCCTCGATC GCGCAGGTGC ACTTCGCCAC CCTGCGCGGC
GGTCCCGACG ACGGCCGCGA GGTGGCCGTG AAGGTGCTGC GTCCCGGCAT GCTGCCGGTG
ATCGACAGCG ATCTCGCGCT GATGCGCGAC GTGGCCACGT GGATGGAGAA GCTGTGGGCG
GACGGCAAGC GCCTGAAGCC GCGCGAGGTG GTCGCCGAGT TCGACAAGTA CCTGCACGAC
GAACTCGACC TGATGCGCGA GGCCGCCAAC GCCAGCCAGC TGCGCCGCAA CTTCGCCAAG
TCCGAGCTGC TGCTGGTGCC CGAGGTGTTC TGGGACTGGT GCACCTCCGA GGTGTTCGTG
ATGGAGCGCA TGCACGGCGT GCGCGTCTCG CACGCCGACG AACTGCGTGC GGCCGGCGTC
GACACGCATA AGCTGGCGCG CGACGGCGTG GAGATCTTCT TCACGCAGGT GTTTCGCGAC
GGCTTCTTCC ACGCCGACAT GCACCCCGGC AACATCCTGG TGAGCGTGGC GCCCGAGTCC
CTGGGCCGCT ATATCGCGCT GGATTTCGGC ATCGTCGGGG CGCTGTCGGA ATTCGACAAG
AATTACCTGG CGCAGAATTT CCTGGCCTTC TTCCAGCGCG ATTACCACCG TGTGGCGCTG
CTGCATGTCG AATCCGGCTG GGCGCCCGAA GAGACCCGCG TGGAGGAGCT CGAAGGCGCC
ATTCGCGCCT GCTGCGAGCC GTACTTCGAT CGCCCCCTCG GCGAGATTTC GCTGGGGCTC
GTGCTGATGC GGCTGTTCCA GACTTCGCGC CGCTTCAACG TGGAAGTGCA GCCGCAGCTG
GTGCTGCTGC AGAAGACGCT GCTCAACGTC GAGGGCCTGG GCCGCCAGCT CGATCCGGAC
CTGGATCTGT GGAAGACCGC CAAGCCATTC CTGGAACGCT GGATGCACGA GCAGATCGGC
TGGCGCGGCC TGGTTGATCG CCTCAAGATC GAGGCGCCGC AATGGGCCAA CATGCTGCCG
GACTTCCCGC GCCTGGCGCA CCAGATCCTG GAGCGCCACG CCCGCGATAA CGGCAGCGCT
CAGACCGCCA CGCTGAGCGC GCTGCTGGCC GAGCAGCGCC GCACCAACCG CCTGCTGTCG
GCGGCGCTGC TGTTCATCGG CGGCTTTGCG GTCGGCATCA TTGCCACGCA TGTGCTGGCG
TGGCTGGCCC GCCACTGA
 
Protein sequence
MTRLFRLCKI IFVILYHGLD QLALSGFKSR RIRALVWVLT LGRRQTRPRG ERLRLALEQL 
GPIFVKFGQV LSTRRDLLPP DVADELAKLQ DRVPPFDPKI AAAIVERSLG KPLSALFHRF
DHHPVASASI AQVHFATLRG GPDDGREVAV KVLRPGMLPV IDSDLALMRD VATWMEKLWA
DGKRLKPREV VAEFDKYLHD ELDLMREAAN ASQLRRNFAK SELLLVPEVF WDWCTSEVFV
MERMHGVRVS HADELRAAGV DTHKLARDGV EIFFTQVFRD GFFHADMHPG NILVSVAPES
LGRYIALDFG IVGALSEFDK NYLAQNFLAF FQRDYHRVAL LHVESGWAPE ETRVEELEGA
IRACCEPYFD RPLGEISLGL VLMRLFQTSR RFNVEVQPQL VLLQKTLLNV EGLGRQLDPD
LDLWKTAKPF LERWMHEQIG WRGLVDRLKI EAPQWANMLP DFPRLAHQIL ERHARDNGSA
QTATLSALLA EQRRTNRLLS AALLFIGGFA VGIIATHVLA WLARH