Gene RSc0459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0459 
Symbol 
ID1219263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp490011 
End bp491081 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content71% 
IMG OID637236817 
Producthypothetical protein 
Protein accessionNP_518580 
Protein GI17545178 
COG category[S] Function unknown 
COG ID[COG4395] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.923223 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTGC ATTGGGGTGG AAAACTCGTA ACGGCCGCAC TGGTTGCGAC GCTCGCATTG 
GGCGCGGCCA TGGATGCCAA CGCCAAGCGC ATCGGCGGCG GCAGCCGTAG CTTCGGCAAG
CAATCGTCCA CCGTGACGCA GCGTCAGCAG ACGCCGCCGA CCACGCCCGC ACCGACCCAG
CAGCAGGCGG CGCCGACCGC GCAGCCGTCG CCGGCGGCGC CCGCGCCGAT GCCGGCGCAG
CAGCCGCGCC GCAACTGGGG CGCCATGCTG GGTGGCCTGG CCGCGGGCCT GGGCCTCGGT
TACCTGTTGT CCAAGTTCGG CCTGGGCGCC GGTCTGGCGT CGCTGCTGTC GAACCTGATC
CTGATCGCGA TCATCGCCTT CGTGGTGATG TGGATCATCC GCAAGCTGCG CGGCAGCCGT
CCGCAGGAGC CGGCGTACGC CACCGGCGGT CCGTCGCTAA GCGGTGACCG CGAACCCTAT
GTGCCGGCGC CTGCCGCACC CGCGGCACAG CCGGCCGCAC CCGCGGCACA GCCGGCCGCA
CCGGTCGCGG CGTCGACCGG CACTGGCAGC GCGGGTAATA CGTCGGGCCT GGGCGCGGGC
GCACAGACCG CGGCGCAAGC CTGGAGCCTC GGCGGCCCGG CCGCGCCGGC GGCCAACGCG
CCGGCCGCGG CGCCCGCTGC GCAGCAGCCG TGGGGGGTGC CGGCCGACTT CGACACGCAG
GCTTTCCTGC GCAACGCCAA GGTCTACTTC GTCCGGCTGC AGGCCGCGTG GGATGCCGGC
AACCTGAACG ACATCCGCGA GTTCACCACG CCGGAGATGT TCGCCGAGAT CAAGATGGAC
CTGACGGACC GCGGCACCGT GCCCAACAAG ACCGACGTGG TGTCGGTGGA GGCCGAGCTG
CTCGGCATCG AGACGCATCC GACCGAATAC CTGGCCAGCG TGCGTTTCTC GGGCATGATC
CGCGAAGAGA CGAGCGCGCC GGCACAGCCG TTCGCCGAGG TGTGGAACCT GACCAAGCCG
ACCCAGGGCA GCGGCGGCTG GGTGCTGGCC GGTATCCAGC AGTTGCAATA A
 
Protein sequence
MKLHWGGKLV TAALVATLAL GAAMDANAKR IGGGSRSFGK QSSTVTQRQQ TPPTTPAPTQ 
QQAAPTAQPS PAAPAPMPAQ QPRRNWGAML GGLAAGLGLG YLLSKFGLGA GLASLLSNLI
LIAIIAFVVM WIIRKLRGSR PQEPAYATGG PSLSGDREPY VPAPAAPAAQ PAAPAAQPAA
PVAASTGTGS AGNTSGLGAG AQTAAQAWSL GGPAAPAANA PAAAPAAQQP WGVPADFDTQ
AFLRNAKVYF VRLQAAWDAG NLNDIREFTT PEMFAEIKMD LTDRGTVPNK TDVVSVEAEL
LGIETHPTEY LASVRFSGMI REETSAPAQP FAEVWNLTKP TQGSGGWVLA GIQQLQ