Gene RSc0455 details

Gene Information

• Locus tag: RSc0455
• ID: 1219259
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003295
• Strand: +
• Start bp: 486293
• End bp: 486736
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 637236813
• Product: hypothetical protein
• Protein accession: NP_518576
• Protein GI: 17545174
• COG category: [F] Nucleotide transport and metabolism; [G] Carbohydrate transport and metabolism; [R] General function prediction only
• COG ID: [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.417137
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGACGGCGG GGGCGCGCGT GGCCGGCTGC GCGCTGTGCG AGGGCGAAGG CGGCGAGCCG 
GTCTGGCGCA ATGCCCGGGC GCGCGTGGTG CTGGTCGAGC ACGCGCGCTT TCCGGGCTTC 
TGCCGCGTCA TCTGGAACGG CCACGTCGCC GAGCAGACCG ACCTGATGGA GGCTGACCGC 
CGCTGGCTGA TGGAGGTGGT CGCCCGCGTC GAGCGCGTGC AGCGCGAAGT GCTGGCGCCG 
GACAAGATCA ACCTCGCCAG CTTCGGCAAC TTCGTGCCGC ACCTGCACTG GCACGTCATC 
CCGCGCTACC GCTGGGACAC GCACTTCCCG GAGGCCGTCT GGGCCGCCGC GCAGCGCGAG 
CCCGATGCGG CGCGGATGGC CGAGGTCGCC GCCAGGCTGC CGGCGCTGTC CTACGCGCTG 
CAGGCCGCGC TGGCCGACGC CTGA 

 

Protein sequence

MTAGARVAGC ALCEGEGGEP VWRNARARVV LVEHARFPGF CRVIWNGHVA EQTDLMEADR 
RWLMEVVARV ERVQREVLAP DKINLASFGN FVPHLHWHVI PRYRWDTHFP EAVWAAAQRE 
PDAARMAEVA ARLPALSYAL QAALADA