Gene RSc0453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0453 
Symbol 
ID1219257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand+ 
Start bp481475 
End bp482056 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content69% 
IMG OID637236811 
Producthypothetical protein 
Protein accessionNP_518574 
Protein GI17545172 
COG category[S] Function unknown 
COG ID[COG1238] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.97409 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACGT GGATCGCCTG GCTCCTCGCC ACCCTGGCCC TGCCCAACGT GGGGCTGCCC 
GCCATCTTCA TCGTCTGCTT TGTCTCGGCG ACGCTGCTGC CGCTGGGGTC CGAGCCGGCG 
GTGTTCGGCT ACATCAAGCT CAATCCCGAG ATGTTCTGGC CGGCCATCTT CGTGGCGGCC 
GCCGGCAATA CGCTGGGCGG CGCGGTCGAC TGGTGGATGG GCTATGCGGC CAAGCTGGCG 
CTGGTGCGGT TCCACCTGGC GCGCCGCCGC CGCCAGCACG ACACCGAGCA CGTGCAGCAC 
ATCCCGCACC CGCAGCGCCA CCGCGCCCCG CCGCTGGACA AGAAATACTT CCGCTGGATG 
CGCCGCATCG GCCCGGTGTC GCTGCTGGCG TCGTGGGTGC CCGGCATCGG CGATCCGCTG 
TGCACGCTGG CCGGCTGGCT GCGGCTGTCC TTCTGGCCCA GCGTGGCCTA CATGGCGATC 
GGCAAGTTCC TGCGCTACCT GGTCATGACC GCCGCGCTGT TGACCCTGCC GGACCGTTTC 
TGGCACGGCA TCTTCGGGTG GATCAAGACG CTCCTGATGT GA
 
Protein sequence
METWIAWLLA TLALPNVGLP AIFIVCFVSA TLLPLGSEPA VFGYIKLNPE MFWPAIFVAA 
AGNTLGGAVD WWMGYAAKLA LVRFHLARRR RQHDTEHVQH IPHPQRHRAP PLDKKYFRWM 
RRIGPVSLLA SWVPGIGDPL CTLAGWLRLS FWPSVAYMAI GKFLRYLVMT AALLTLPDRF 
WHGIFGWIKT LLM