Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0449 |
Symbol | ilvA |
ID | 1219253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 476953 |
End bp | 478476 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637236807 |
Product | threonine dehydratase |
Protein accession | NP_518570 |
Protein GI | 17545168 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1171] Threonine dehydratase |
TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.545287 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCATCG ACTATCTCAA GAAGATCCTG ACCGCCAAGG TCTACGACGT CGCGCAGGAA ACCGACCTGC AGCCCGCGCC CAGCCTGTCG GCACGCATCG GCAACCGCGT GTACCTCAAG CGCGAAGACA ACCAGCCGGT GTTCTCGTTC AAGCTGCGCG GCGCCTACAA CAAGATGGCG TCGCTGACGC CGGCCGAGCG CAAGCGGGGC GTGATTACGG CATCGGCGGG CAACCATGCG CAGGGCGTGG CGTTCAGCGC CGCCCGGCTC GGCTGCAAGG CGGTCATCAC CATGCCGGTG ACGACGCCGC AGCTGAAGAT CGACGGCGTG CGCTCGCGCG GCGGCGAGTG GGTCGAGATC GTGCTGCACG GCGAAAGCTA TACGGATGCG TACGACCACG CCGTCAAGCT GCAGGAGAAG CACGGCTACA CCTTCGTCCA CCCGTTCGAC GATCCGGAGG TGATCGCGGG CCAGGGCACC ATTGCCGTGG AGATCCTGCG CCAGCATCCG GAGCCGATCC ACGCCATCTT CGCGGCGATC GGCGGCGGCG GGCTGGTGTC GGGCATCGCG GCCTACGTGA AGGCGGTGCG CCCGGACATC AAGGTGATCG GCGTGCAGAC GGCGGATTCC GATGCGATGG CCTGCTCGGT GGCGGCCGGC AAGCGGGTGA CGCTGCGGGA CGTGGGCCTG TTCTCGGACG GCACGGCGGT CAAGCTGGTC GGCAAGGAAA CCTTCCGCCT GACCCGCGAA CTGGTCGACG AGATCATCAC CGTGGACACC GACGCCATCT GCGCGGCGCT CAAGGACGTG TTCCAGGACA CCCGCAGCGT GCTGGAGCCG GCGGGCGCGC TGGCGCTGGC CGGGCTCAAG CAGTACGCGG CGGACCGCAA GCTCAAGAGC CAGTCGCTGG TGGCGATCGC GTCCGGCGCC AACATGAACT TCGACCGCCT GCGCTTCGTG GCCGAGCGCG CCGAGGTGGG CGAGGCGCGC GAAGCCGTGT TCGCGGTGAC GATTCCGGAG GAGCGCGGCA GCTTCAGGCG CTTCTGCGAG GTGGTCGGCT GGTCGCGCAG CGTGACCGAG TTCAACTACC GCATCGCCGA CAAGAACGAG GCGCACATCT TCGTGGGCGT GCAGATCGCC TCGCGCGCCG AGGGCGACAA GATCGCCGAC GGCTTCCGCA AGCACGGCTT CCCGACGCTG GACCTGTCCA ACGACGAACT GGCCAAGCAG CACATCCGCT ACATGGTGGG CGGGCATTCG CCGCTGGCCG AGAACGAGCT GCTGTACCGC TTCGAGTTTC CCGAGCGGCC CGGCGCGCTG ATAAAGTTCC TCTCGAGCAT GAGCCCGAAC TGGAACATCA GCCTGTTCCA CTACCGCAAC CAGGGCGCGG ATTCGAGCAA CATCCTGGTC GGCATCCAGG TGCCGAAGAA CGAGAAGCGC GCGTTCAAGG CCTTCCTCGC CACGCTCGGC TACACGTTCT GGGACGAAAG CGAGAACCCG GTCTACGGAC TGTTCCTGCG CTGA
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Protein sequence | MAIDYLKKIL TAKVYDVAQE TDLQPAPSLS ARIGNRVYLK REDNQPVFSF KLRGAYNKMA SLTPAERKRG VITASAGNHA QGVAFSAARL GCKAVITMPV TTPQLKIDGV RSRGGEWVEI VLHGESYTDA YDHAVKLQEK HGYTFVHPFD DPEVIAGQGT IAVEILRQHP EPIHAIFAAI GGGGLVSGIA AYVKAVRPDI KVIGVQTADS DAMACSVAAG KRVTLRDVGL FSDGTAVKLV GKETFRLTRE LVDEIITVDT DAICAALKDV FQDTRSVLEP AGALALAGLK QYAADRKLKS QSLVAIASGA NMNFDRLRFV AERAEVGEAR EAVFAVTIPE ERGSFRRFCE VVGWSRSVTE FNYRIADKNE AHIFVGVQIA SRAEGDKIAD GFRKHGFPTL DLSNDELAKQ HIRYMVGGHS PLAENELLYR FEFPERPGAL IKFLSSMSPN WNISLFHYRN QGADSSNILV GIQVPKNEKR AFKAFLATLG YTFWDESENP VYGLFLR
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