Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0445 |
Symbol | |
ID | 1219249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 473214 |
End bp | 473918 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637236803 |
Product | putative signal peptide protein |
Protein accession | NP_518566 |
Protein GI | 17545164 |
COG category | [R] General function prediction only |
COG ID | [COG3271] Predicted double-glycine peptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.248925 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGGGA TGGGGTGGGC GACGCTGCTG GCGATGGCAG GGGCGCTGGC GCCGCTGATG GTGCCGGCAC CGGCGCGCGC CGGCTCGATC GACATGCCGG GCGCGGGCGG CGCGCTGTAC ACCGTGCCGG TCACGAGCAT GAAGGAGATG CGCTTCCTGC GCACGATCCG GCAGCGCTTC GATTTCAGCT GCGGCTCGGC CGCGGTGGCG ACGCTGCTGA CGTACCAGTA CGGCTATCCG GTCAGCGAAC AGGTCGTGTT CGAGGCCATG TACCGGCATG GCAACCAGGA GAAGATCCGG CGCGAGGGGT TCTCGCTGCT CGACATCAAG CGCTATCTCG AGTCGCAGGG CTTCGAGGCG GACGGCTTCG AGCAGCCGCT GGATGCGTTG AAGGATGCCC ACCTGCCCGC CATCGTGCTG CTGAGCGAGA ACGGTTACCA CCACTTTGTC GTGGTCAAGG GCGTCCAGGC GGGGCGCGTG CTGGTCGGCG ATCCGGCCAT GGGCACGCGC GCGATTCCCC GTGCCAGCTT CGAGGGCATG TGGGACAACC ATTTGCTGTT CGTCATCCAC AACCGCGAGG AACGCGCCGC GTTCAACGCC GGAGCGGATT GGCGCGTCGC GCCGCGCGCG CCGCTGGCCG AAGGGCCCGA GCGCAGCGGC CTGGGGAACA TCGTCATCCC CAAGCACGGT CCGGGCGATT TCTGA
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Protein sequence | MRGMGWATLL AMAGALAPLM VPAPARAGSI DMPGAGGALY TVPVTSMKEM RFLRTIRQRF DFSCGSAAVA TLLTYQYGYP VSEQVVFEAM YRHGNQEKIR REGFSLLDIK RYLESQGFEA DGFEQPLDAL KDAHLPAIVL LSENGYHHFV VVKGVQAGRV LVGDPAMGTR AIPRASFEGM WDNHLLFVIH NREERAAFNA GADWRVAPRA PLAEGPERSG LGNIVIPKHG PGDF
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