| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0432 |
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| Symbol | |
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| ID | 1219236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 460162 |
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| End bp | 461904 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637236790 |
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| Product | hypothetical protein |
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| Protein accession | NP_518553 |
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| Protein GI | 17545151 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.744258 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.621474 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGTACC GCCGCGCCGC TCGACCTGTC GCTACTGTAT TGATCCACGC CATGCAGACC
TATCCGCTGG TGTTCCATGC CTCGCCCGAC CAGACCATCG CCTGGCGCGA CGGCGCGCCG
GTTGCCGTGC GCACCTTCCT CGCCGAAGTG GCACAGCTGG CCGCGGCGCT GCCTGCGGGC
GCGCATGTCT TCAACGCGTG CACCGACCGC TACCGGTTCA CGGTCGGCCT GTGCGCGACG
CTGGTCGCCG GCAAGATCAG CCTGCTGCCG GCCTCGCAGA CGCCGGAGAC CGTGCGCCGG
CTGGCCGCGT TCGCGCCCGA TGTGTTCTGC CTGCACGATG CGCCCGACTG CGCGATCGCG
CTGCCCCGCT TCCGGTTTCC CGAGCCGCTG CCGCCTGCGG GGGCCGATGC GCCGGTCGAC
GTGCCGCAGA TCGATGCATC GCGGGTGATG GCCTATATCT TCACGTCCGG CTCGACCGGC
ACGCCCGTGC CGCACCGCAA GACGTGGGGC GCGCTCGTCG AGGGCGTGCG CGCGTCGGCC
GCGCGCCTCG GGCTGCTCGA TGCGCACGCC TGCACGCTGG TGGGCACGGT GCCGCCGCAG
CATATGTACG GCTTCGAGTC GACGGTGCTG CTCGCGCTGG TCGGCGGCCT CGCCTTCAGC
AACCGGCTGC CGTTCTATCC GGCCGACATC CGGGCGGCGC TCGAAGCGGT GCCCCAGCCA
CGCGTGCTGG TGACCTCGCC CATCCATCTG CGTGCGCTGC TGTCGTCGGA GCGCGCGCTG
CCGCCGGCCG CGCTGGTGCT GTCGGCGACC GCGGCGCTGC CCGAGCCCCT GGCGAGCGAG
GCCGAGGCAC GGCTCGCGGC GCCCCTGATC GAGATCTACG GCAGCACCGA AACCGGCCAG
ATCGCCACGC GGCGGACCGC GCAGGGCGCC ACGTGGCACC TGCAGCCGGG CATCCGGCTC
GAAGCCCGCG CCGGCACGCC CGATGAGGAC GGACCGGTCA CCTGGGCCTC GGGCGCGCAC
CTCGATGCAC CCGTGCCGAT GGGCGACACG CTCGAGCTGA TCGACGACAC CCACTTCCTG
CTGCACGGAC GCAAGGCCGA TCTCATCAAC GTCGCCGGCA AGCGGACTTC GCTGGCCTAC
CTGAACCACC AGCTCAACGC GATACCGGGC GTCGAGGACG GCGTGTTCTT CATGCCGTCC
GCCGCGGACA ACGGCAGCGA GCCGCCCGCG CGCCTGGCCG CGCTGGTGGT CGCACCGGAG
CTTGCCGCCG CCGACCTGCT GCACGCCCTG CGCGAGCGCA TCGATCCGGC CTTCCTGCCG
CGCCCGCTGC TGTTGGTCGA GGCGCTGCCG CGCGATGCCA CCGGCAAGCT GCCGCGCGAT
GCGCTCGCGG CGCTGATTGC GCAGCACGGG CACCGCGGTG CCCGCGCAGG TGCGCCGGCC
CCGATCACCT TCACGATCCC CGCCGATCAC CCCGCCCTGC CGGGCCATTT CCCCGGGCAC
CCGATCGTGC CGGGCGTCGT GCTGCTCGAT CAGGCGATCC GCCGGATCGG CGCGGCGCTG
AACCGGCCGT TCGACGCCTG CCGGCTCAGT TCGGCGAAAT TCCTCAGCCC CGCCGCGCCC
GGCGTGCCGC TCGCGCTCGC CTTCGAGGCC ACGGCCAGCG GGGCGATCCG CTTCACGGTC
AGCGCCGGCG AGCGCGAAGT CGCGAGCGGC GTGCTGGCGC AACAGGAGGC GGCGCGCCCA
TGA
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| Protein sequence | MRYRRAARPV ATVLIHAMQT YPLVFHASPD QTIAWRDGAP VAVRTFLAEV AQLAAALPAG
AHVFNACTDR YRFTVGLCAT LVAGKISLLP ASQTPETVRR LAAFAPDVFC LHDAPDCAIA
LPRFRFPEPL PPAGADAPVD VPQIDASRVM AYIFTSGSTG TPVPHRKTWG ALVEGVRASA
ARLGLLDAHA CTLVGTVPPQ HMYGFESTVL LALVGGLAFS NRLPFYPADI RAALEAVPQP
RVLVTSPIHL RALLSSERAL PPAALVLSAT AALPEPLASE AEARLAAPLI EIYGSTETGQ
IATRRTAQGA TWHLQPGIRL EARAGTPDED GPVTWASGAH LDAPVPMGDT LELIDDTHFL
LHGRKADLIN VAGKRTSLAY LNHQLNAIPG VEDGVFFMPS AADNGSEPPA RLAALVVAPE
LAAADLLHAL RERIDPAFLP RPLLLVEALP RDATGKLPRD ALAALIAQHG HRGARAGAPA
PITFTIPADH PALPGHFPGH PIVPGVVLLD QAIRRIGAAL NRPFDACRLS SAKFLSPAAP
GVPLALAFEA TASGAIRFTV SAGEREVASG VLAQQEAARP
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