Gene RSc0422 details

Gene Information

• Locus tag: RSc0422
• Symbol: ssb
• ID: 1219226
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003295
• Strand: +
• Start bp: 450600
• End bp: 451136
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637236780
• Product: single-stranded DNA-binding protein
• Protein accession: NP_518543
• Protein GI: 17545141
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0629] Single-stranded DNA-binding protein
• TIGRFAM ID: [TIGR00621] single stranded DNA-binding protein (ssb)

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.508741
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCGTCCG TCAACAAAGT CATCATCGTC GGCAATCTCG GCGCCGATCC CGAAACGCGT 
TACATGCCGA GCGGCGACGC CGTCACCAAT ATCCGCGTGG CGACCACCGA CCGCTACAAG 
GACAAGGCCA GCGGCGAAAT GCGCGAGGCC ACCGAGTGGC ACCGCATCGC CTTCTTCGGC 
CGCCTGGCCG AAATCGCCGG CGAATACCTG AAGAAGGGTT CGCAGGTCTA CGTCGAAGGC 
CGCCTCAAGA CCCGCCAGTG GGAGAAGGAC GGCCAGAAAC AGTACAGCAC CGAAATCGTC 
GCCGAGCAGA TGCAGATGCT CGGCAGCCGC CAGGGCATGG GCGGCGAGGG CGGTGGCGGC 
GGTGGTGGCT ACTCGCGCGG CGAATCGTCG GGCGGTGGCG GTTACGGCGG TGGCCGTGCC 
CAGGGCGGCG GCGGTATGAG CCGCGGCGAA GGCGGTGGTG GTCAGGGCGG CGGCGCGCGC 
CGTCAGCAGG CGCCTTCGAA TGGGTTTGAG GATATGGATG ACGATATTCC GTTCTAA 

 

Protein sequence

MASVNKVIIV GNLGADPETR YMPSGDAVTN IRVATTDRYK DKASGEMREA TEWHRIAFFG 
RLAEIAGEYL KKGSQVYVEG RLKTRQWEKD GQKQYSTEIV AEQMQMLGSR QGMGGEGGGG 
GGGYSRGESS GGGGYGGGRA QGGGGMSRGE GGGGQGGGAR RQQAPSNGFE DMDDDIPF