| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0416 |
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| Symbol | |
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| ID | 1219220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 443612 |
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| End bp | 444190 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637236774 |
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| Product | hypothetical protein |
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| Protein accession | NP_518537 |
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| Protein GI | 17545135 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0693] Putative intracellular protease/amidase |
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| TIGRFAM ID | [TIGR01382] intracellular protease, PfpI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.894968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.433586 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGAAGA AGATTCTGAT GCTGGTGGGC GACTATGTCG AAGACTACGA AGTCATGGTG
CCCTTCCAGG CCCTGCAGAT GGTCGGCCAC ACCGTGCACG CGGTCTGCCC GGACAAGCAG
GCCGGCGAAT CGATCGCCAC CGCCGTGCAC GACTTCGAGG GCGCGCAGAC GTATTCCGAG
AAGCCGGGCC ACCGCTTCAC CGTCAATGCC AGCTTCGCCG ACGTCGATCC CGCCGCCTAT
GACGCGCTGG TCGTGCCCGG CGGCCGCGCT CCCGAATACC TGCGCCTCGA TCCGCGCGTG
CTCGACATCG TGCGCCACTT CAGCGGCGCC GGCAAACCCA TCGCGGCGAT CTGCCACGGC
GCGCAGCTGC TGTCGGGGGC GGGCGTCCTG AAGGACCGCG CGTGCTCCGC CTATCCGGCA
TGTGGCCCGG AAGTCACGGC AGCGGGCGGC ACCTACCAGG ACATCCCCGT CGACCAGGCC
CATACCGACG GCAACCTGGT GACCGCGCCC GCGTGGCCGG CCCACCCCGC ATGGCTGGCG
CAATTTCTTG AAGTCCTGGG GACGCGGGTC CTACACTGA
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| Protein sequence | MAKKILMLVG DYVEDYEVMV PFQALQMVGH TVHAVCPDKQ AGESIATAVH DFEGAQTYSE
KPGHRFTVNA SFADVDPAAY DALVVPGGRA PEYLRLDPRV LDIVRHFSGA GKPIAAICHG
AQLLSGAGVL KDRACSAYPA CGPEVTAAGG TYQDIPVDQA HTDGNLVTAP AWPAHPAWLA
QFLEVLGTRV LH
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