Gene RSc0412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0412 
Symbol 
ID1219216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp439256 
End bp439843 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content71% 
IMG OID637236770 
Producthypothetical protein 
Protein accessionNP_518533 
Protein GI17545131 
COG category[R] General function prediction only 
COG ID[COG1778] Low specificity phosphatase (HAD superfamily) 
TIGRFAM ID[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.006802 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCCAGCC CGGCCGATTC CCCCGTCCAC AGCAACATCG AGGCACGCTT CCCGCAGGCA 
ATGGAGCGCG CCGCCCGCGT GCGCCTGATG ATCTTCGACG TGGACGGCGT GCTGACCGAC
GGCCGCCTGC TGGTCGGCCC GCAGGGCGAG ATCAGCAAGG CCTTCGATAC GCTGGACGGC
CACGGCATCA AGCTGCTGGC CCAGGCGGGC ATTACGCCGG CCATCATCAC CGGGCGCGAA
TCCGAGATCG TGGCCTGGCG CGCCGGGGAA CTCGGCATCG AACATCTGTA CCAAGGTGTG
GCCGACAAGC GCGAGGCCTT CGTCCACCTG CTTGCCGCCA CAGCGCTGCA GCCCGCCGAC
GCCGGCTACA TGGGCGACGA CTGGCCCGAC CTGCCGGTCA TGGCGCAGGT CGGCTTTGCC
GCCTGCCCCG CCCAGGCCCA CGCCGAGGTG CGCAGCCGCT GCCACTATGT GACCCGGGCC
AAGGGCGGTC GCGGCGCGGC GCGTGAAGTC GCCGACCTGA TCCTCAAGGC CCAGGGCGCC
TACGACGACC TGCTCGCGCA ACTGCTGCAA GCGCCCAACG CCCCCTGA
 
Protein sequence
MSSPADSPVH SNIEARFPQA MERAARVRLM IFDVDGVLTD GRLLVGPQGE ISKAFDTLDG 
HGIKLLAQAG ITPAIITGRE SEIVAWRAGE LGIEHLYQGV ADKREAFVHL LAATALQPAD
AGYMGDDWPD LPVMAQVGFA ACPAQAHAEV RSRCHYVTRA KGGRGAAREV ADLILKAQGA
YDDLLAQLLQ APNAP