Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0403 |
Symbol | |
ID | 1219207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 431795 |
End bp | 432685 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637236761 |
Product | hypothetical protein |
Protein accession | NP_518524 |
Protein GI | 17545122 |
COG category | [R] General function prediction only |
COG ID | [COG1660] Predicted P-loop-containing kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.7432 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.486178 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGATCA TTCTCATCAC CGGTATGTCG GGTTCGGGGA AGTCGGTCGC CCTGAATGTG CTCGAAGACG CAGGCTACTA CTGCGTGGAC AACCTGCCCG CGCAGTTCAT CCCCGAGCTG GCGCGCTATC TGGCGGACCA GGGCTACACG CACCTGGGCG TCGCCACCGA CATCCGCAGC CGCGAATCGC TGCGCAAGGT GCCCGAGACG ATCACCCAGC TGCGCAAGGA ACACGATGTC CGCATGCTGT TCCTGACGGC CAGCACGAAT GCGCTGGTGC AGCGCTACTC GGAGACGCGC CGGCGCCATC CGCTGTCGAT CCGCAACGGC CGGCCCGATG CGGGCAATCC GCCCAGCGCG GCCAAGGGTC CCGACACCTC GCTCATCGAA GCCATCGAAA TGGAGCGGGA GCTGCTGAGC CCGCTCGCCG ATCCGGCACA CCGCATCGAC ACCAGCACCC TGCGCACCAA CGCCCTGCGC GCGTACATCA AGGAATTCAT CAGCGACGAG CCGCACGACA TCACCCTGAT GTTCGAATCG TTCGGCTTCA AGCACGGCGT GCCGACGGAC GCCGACCTCG TGTTCGACGT GCGCTCGCTG CCCAACCCCT ACTACGATAC GCAGCTGCGG CCGCTGACCG GGCGTGACCA GCCCGTCATC GACTTCCTGC AAAGCCAGCC GATGGTGCTG GCGATGGCCG AGGACATCCG CGCCTATGTC GAAAAGTGGC TGCCAAGTTT CATTGCCGAC AACCGCAGCT ACCTGACCGT GGCCATCGGC TGCACGGGTG GGCAGCACCG CTCCGTCTAT ATCGCGGAAC GGCTCGCCAC CTACTTCCGT GCGCATGGTA ATGTGTTGGT CCGCCACCGC GAACTGGCGG TAGACGCTTA A
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Protein sequence | MRIILITGMS GSGKSVALNV LEDAGYYCVD NLPAQFIPEL ARYLADQGYT HLGVATDIRS RESLRKVPET ITQLRKEHDV RMLFLTASTN ALVQRYSETR RRHPLSIRNG RPDAGNPPSA AKGPDTSLIE AIEMERELLS PLADPAHRID TSTLRTNALR AYIKEFISDE PHDITLMFES FGFKHGVPTD ADLVFDVRSL PNPYYDTQLR PLTGRDQPVI DFLQSQPMVL AMAEDIRAYV EKWLPSFIAD NRSYLTVAIG CTGGQHRSVY IAERLATYFR AHGNVLVRHR ELAVDA
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