| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0402 |
|---|
| Symbol | |
|---|
| ID | 1219206 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 431067 |
|---|
| End bp | 431717 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637236760 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_518523 |
|---|
| Protein GI | 17545121 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.927343 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGACG ATATTGCCCT CTCCCCGTTT TCCCCGCTGC CTCCGCTGCC GACCGAGCTG
CCATTGTTCC CGCTGCACAC GGTGCTGTTT CCGGGTGGCC TGTTGCCGCT GCGCATCTTC
GAGGCCCGCT ACATCGACAT GGTGCGCACC TGCCTGCGCG AGCAGACCCC ATTCGGCGTC
TGCCTGATCG AGCGCGGCAA CGAGGTCGCA GCAGACACGC CGACCGTCCC GGTCGACATC
GGCTGCATCG CCCATATCGT CGAATGCGAC ATGGAGCAGC TCGGCCTGCT GATGATCAAG
GCGCGCGGTA CGCAGCGCTT CAAGGTGCGG TCGGTCGACA CCACCGTCGG CGGCCTGCTG
CGCGGCACCG TGGAGCCGAT CGGCGCCGAC CTGGAAGACT GCAAGGGCGA ACTGTTCGAC
GATTGCGTCA ATGCCCTGCG GCGCATCGTC ACGACACTGG GCGCGCGCGA GGAAGGCCAG
GTGCCGCTGG CCGAGCCCTA TGACTGGGCC AGCCCGAGCT GGGTCGGCAA CCGGCTGTGC
GAACTGCTGC CGGTGCCGCT CAAGGCCAAG CAGAAGCTGA TGGAACTGAT GGATGCCGGC
ATGCGCATCG AGATCGTCCA TCGCTATATG AAGCAGCACC ACATCCTGTA G
|
|---|
| Protein sequence | MQDDIALSPF SPLPPLPTEL PLFPLHTVLF PGGLLPLRIF EARYIDMVRT CLREQTPFGV
CLIERGNEVA ADTPTVPVDI GCIAHIVECD MEQLGLLMIK ARGTQRFKVR SVDTTVGGLL
RGTVEPIGAD LEDCKGELFD DCVNALRRIV TTLGAREEGQ VPLAEPYDWA SPSWVGNRLC
ELLPVPLKAK QKLMELMDAG MRIEIVHRYM KQHHIL
|
|---|
| |