Gene RSc0401 details

Gene Information

• Locus tag: RSc0401
• Symbol: mutY
• ID: 1219205
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003295
• Strand: +
• Start bp: 429960
• End bp: 431048
• Gene Length: 1089 bp
• Protein Length: 362 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 637236759
• Product: A/G-specific adenine glycosylase protein
• Protein accession: NP_518522
• Protein GI: 17545120
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1194] A/G-specific DNA glycosylase
• TIGRFAM ID: [TIGR01084] A/G-specific adenine glycosylase

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

TTGCCCGAGG ATTTCGCTGT CCGCGTGATC GCCTGGCAGC GCCGCCACGG CCGCCATCAC 
CTGCCGTGGC AGAACACCGG TGACGCCTAT CGCGTGTGGC TGTCGGAGAT CATGCTGCAG 
CAGACGCAGG TGTCGGCGGT GCTGGGCTAC TACGCCCGCT TCGTGGAGCG GTTCCCGACC 
GTGCAGGCAC TGGCCGCGGC ACCCGCGGAC GACGTGATGG CCGCCTGGGC GGGCCTGGGC 
TACTACACCC GCGCGCGCAA TCTGCACCGC TGCGCGCAGA TCGTGGTGGC CGAGCATGGC 
GGTGCGTTTC CGCGCGATCC CGAGGCGCTG GCGGCGCTGC CGGGCATCGG GCGCTCCACC 
GCCGCGGCCA TCGCCGCGTT TTCGTACGGC GTGCGCGCGG CCATCCTCGA CGGCAACGTC 
AAGCGCGTGT TTGCGCGCGT CTTCGGCATC GACGGCTTTC CCGGCGACAA GCGCGTCGAG 
GAAACGATGT GGCGCATCGC CGAGACCGTG CTGCCCCCGG CGGACGGCAT CCAGTCGTAC 
ACGCAGGGCC TGATGGACCT GGGCGCCACG GTCTGCACGC GCGGCAGGCC GGCATGCCTG 
ACCGGCGAGC GCGCATGTCC GCTCGAATCG CTGTGCGAGG CGCGCCGGAC CGGGCGCGTG 
ATGGAACTGC CCGTGCCGCG TCCGCGCAAG GCCATCCCCG AGCGCGCGGC GACCCTGCTG 
ATGGCGCTGC ATGACGGCGC GGTGCTGCTC CAGCGCCGTC CGCAGCGCGG CATCTGGGGC 
GGGCTGTGGT CGCTGCCGCT GGTGGGCGAC ATGGACACGG CGCTCGATGC GCATCCGGTG 
GCGACGGACG TGGCGCATGC CGCTGCGCAG GCCTACGGTA CGGTGTCATC GATCGAGTCG 
GCCGGCGTGC TCATGCATAC CTTTACGCAT TTCCGCCTGC AGATGCACCT GCTGCGCGCG 
GACATCCGCC AGCCCGCCGC GCTGGGCGAC GACTGGCGCT GGGTGCCGCT CGTGCGGTTC 
GATACCGTGG GAATGCCGGC GCCCGTGAAG CTGGCGCTGG AGATGCTGGC GCAGCCGAGC 
CTGGTGTGA 

 

Protein sequence

MPEDFAVRVI AWQRRHGRHH LPWQNTGDAY RVWLSEIMLQ QTQVSAVLGY YARFVERFPT 
VQALAAAPAD DVMAAWAGLG YYTRARNLHR CAQIVVAEHG GAFPRDPEAL AALPGIGRST 
AAAIAAFSYG VRAAILDGNV KRVFARVFGI DGFPGDKRVE ETMWRIAETV LPPADGIQSY 
TQGLMDLGAT VCTRGRPACL TGERACPLES LCEARRTGRV MELPVPRPRK AIPERAATLL 
MALHDGAVLL QRRPQRGIWG GLWSLPLVGD MDTALDAHPV ATDVAHAAAQ AYGTVSSIES 
AGVLMHTFTH FRLQMHLLRA DIRQPAALGD DWRWVPLVRF DTVGMPAPVK LALEMLAQPS 
LV