| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0397 |
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| Symbol | lolB |
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| ID | 1219201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 424067 |
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| End bp | 424696 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637236755 |
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| Product | outer membrane lipoprotein LolB |
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| Protein accession | NP_518518 |
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| Protein GI | 17545116 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis |
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| TIGRFAM ID | [TIGR00548] outer membrane lipoprotein LolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000178523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGACCG TGTTTTCGCG AGCGCTCGGC GCGCTGGTGC TGGGTGTTGC GTGCGCGCTG
CTTGCAGGCT GCGCCAGCGT ACGGCCGGCC AACGACCTCT TCGCCGGCAC GCAAGACGGC
GACGCCACCA TCACGCGCTA CCAGGGCCGC TTTTCGGCGC GCTACGTGCA GGACGACGCG
CAGCAGAGCG CGGTTGGCAG CTTCCTGTGG CGCGAACGGG GGGCGGACGT GCAGCTGGAG
CTGATGTCGC CGCTGGGCCA GACGCTCGCC ATCGTCAGCC AGAACCGGCA GGGCGCCACC
CTGGAACTGC CTAACCAGCC GCCGCGCCGC GCCGCCGAAG TGGATACGCT GATGCAGGAC
GCGCTCGGCT TCTCGCTGCC GGTCTCCGGC CTGCGCGACT GGCTGCGCGC GCGCCCCACG
CCCGGCACGC CGGCCCGCGT GGCGCGCGAC GCGCAATCGC GCCCCGAGAC CATTGAGCAG
AACGGGTGGA CGGTGCACTA CGTCGCCTGG AGCGACGATG GCGACAACAG CACCGCCAAT
GCCCGCGTAC GCCGGCTGGA TCTCGACCGG CCCCAGGGCG CGGGCGGCGC GCCGGGCCCG
CTGTCCGTGC GCCTCGTGCT CGACCAGTAA
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| Protein sequence | MATVFSRALG ALVLGVACAL LAGCASVRPA NDLFAGTQDG DATITRYQGR FSARYVQDDA
QQSAVGSFLW RERGADVQLE LMSPLGQTLA IVSQNRQGAT LELPNQPPRR AAEVDTLMQD
ALGFSLPVSG LRDWLRARPT PGTPARVARD AQSRPETIEQ NGWTVHYVAW SDDGDNSTAN
ARVRRLDLDR PQGAGGAPGP LSVRLVLDQ
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