Gene RSc0385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0385 
Symbol 
ID1219188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp413289 
End bp413927 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content73% 
IMG OID637236742 
Producthypothetical protein 
Protein accessionNP_518506 
Protein GI17545104 
COG category[R] General function prediction only 
COG ID[COG1279] Lysine efflux permease 
TIGRFAM ID[TIGR00948] L-lysine exporter 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.394901 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGGC CCGGCCCGGA GAGCGCGCCG CTGATCGGCG CGGCGCTGTC GGGCTTCGGC 
CTGGGCGCGA GTCTGATCGT GGCGATCGGC GCGCAGAACG CGTACGTGCT GCGGCAAGGG
CTACGCCGCG AATACGTGCT CGGCGTGGTG CTGATCTGCG CGCTGTGCGA CATGGCGCTG
ATCGCGCTGG GCGTGGCGGG CATGGGCACG CTGATCTCGG CGCACCCGGC ATGGCTGACG
GCGGTGCGCT GGGCCGGCGC GGCCTTCCTG CTGGCCTACG GCGCACGGGC GTTCCGGGCG
GCGTGGCGCG GCGCCGAGCG GCTGCAGGCG CGCAACGGCG ACAAGGCCTC GCATGCGCAG
GTGCTGGCGT CCGCGCTGGC GCTGTCGCTG CTCAATCCGC ACGTCTATCT CGACACCGTG
GTGCTGCTGG GCGCCATCGG CGGGCGCTAC GCGATGCCGG CCAACGTGGC GTTCGCCGGC
GGCGCGATGT GCGCGTCGAT CCTGTGGTTC TCGCTGCTGG GGTTCGGCGC ACGGCTGCTG
GAGCCGGTGT TCGCCAGGCC GGTCGCCTGG CGGGTGCTCG ATGCGCTGAT CGGCGCGGTG
ATGTGGGCGA TCGCGCTGAC GCTGCTGATG GGCGGTTAG
 
Protein sequence
MTGPGPESAP LIGAALSGFG LGASLIVAIG AQNAYVLRQG LRREYVLGVV LICALCDMAL 
IALGVAGMGT LISAHPAWLT AVRWAGAAFL LAYGARAFRA AWRGAERLQA RNGDKASHAQ
VLASALALSL LNPHVYLDTV VLLGAIGGRY AMPANVAFAG GAMCASILWF SLLGFGARLL
EPVFARPVAW RVLDALIGAV MWAIALTLLM GG