| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0372 |
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| Symbol | ctaB |
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| ID | 1219175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 399615 |
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| End bp | 400547 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637236729 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | NP_518493 |
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| Protein GI | 17545091 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.591826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.846144 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACCG TGGCTTCCAC TTCAACGTCG ACCCAACCCT CCGGCTGGCG ACACACCGCG
TCGCAATATG CGGCGCTGAC CAAACCGCGT GTGACGCAAC TGGCTGTGTT CTGCGCCGTG
ATCGGCATGT TTCTCGCCAC GCCGGGCATG GTGCCGTGGC CGGTGCTGAT CGGCGGCGCC
GTCGGCATCT GGCTGTTTGC CGGCGCCGCC TTCGCCATCA ACTGCCTGGT CGAGCGCAAG
ATCGACGCGA TGATGCGCCG CACGGCCTGG CGCCCGTCGG CCAGCGGCGA GCTGGGGGCG
CGGCAGATCC TGCTGTTCTC GCTGGTGCTC GGCGGCGCGG GCATGTGGAC GCTGCATGTG
TTCGCCAACG ACCTGACGAT GTGGCTGACC TTCGCCACCT TCATCGGCTA CGCCATCATC
TACACGCTGC TGCTCAAGCC GGCCACGCCG CAGAACATCG TGATCGGCGG CCTGTCGGGC
GCGATGCCGC CGGCGCTGGG GTGGGCTGCG GTGGCCAACA GCGTGCCGGC CGAGGCGTGG
ATCCTGGTGC TGATCATCTT TACCTGGACG CCGCCGCATT TCTGGGCACT GGCGCTGTAT
CGCCGCGCCG ACTACGCCAA GTCCGGCCTG CCCATGCTGC CGATCACGCA CGGCGAGAAA
TTCACGCTGC TGCACATCCT GCTGTACACG CTGATCATGG TCGCCGCCAC CATCCTGCCG
TTCGTGCATG GCATGAGCGG CTATCTCTAC CTGGCGGTGG CGCTGGTGCT CGGCTTCGGC
TTCCTCGTCC ATGCGTGGCG GATGTACCGC AACTATTCGG ATGCGCTGGC GCAGAAGACG
TTCCGGTACT CGATCGTCTA CCTGTCGCTG CTGTTCGCGG CGCTGCTGAT TGACCACTAC
TTCAAGTTCG GGCCGCAGGG CGCGGCGCTG TGA
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| Protein sequence | MNTVASTSTS TQPSGWRHTA SQYAALTKPR VTQLAVFCAV IGMFLATPGM VPWPVLIGGA
VGIWLFAGAA FAINCLVERK IDAMMRRTAW RPSASGELGA RQILLFSLVL GGAGMWTLHV
FANDLTMWLT FATFIGYAII YTLLLKPATP QNIVIGGLSG AMPPALGWAA VANSVPAEAW
ILVLIIFTWT PPHFWALALY RRADYAKSGL PMLPITHGEK FTLLHILLYT LIMVAATILP
FVHGMSGYLY LAVALVLGFG FLVHAWRMYR NYSDALAQKT FRYSIVYLSL LFAALLIDHY
FKFGPQGAAL
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