Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0358 |
Symbol | yibK |
ID | 1219161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 388696 |
End bp | 389166 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637236715 |
Product | putative tRNA/rRNA methyltransferase protein |
Protein accession | NP_518479 |
Protein GI | 17545077 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
TIGRFAM ID | [TIGR00185] rRNA methylase, putative, group 2 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0648772 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCAACG TCGTTCTCGT CGAGCCCGAA ATTCCGCCCA ACACGGGCAA TGTGATCCGG CTGTGCGCCA ACACCGGCGC GCAGCTGCAC CTGATCGAAC CACTCGGTTT TCCGCTCGAG GATGCGCGCA TGCGCCGCGC CGGCCTGGAC TACCACGAAT ACGCCACGAT GCGCGTGCAC GCGAGCTGGG ACGCGTTCCT GCGCGATGCG CAGCCCGACC CCGCGCGCAT GTTCGCGCTC ACCACGCGCG GCTCGACGCC GTTCGCGGGA CTGGCGTTCC AGCCGGGCGA CTGGTTCGTG TTCGGATCGG AAACGCGGGG CCTGTCGGAA GAGCGCCGCG CAGGGTTTCC GCCATCGCAG CGCATCCGCC TGCCGATGCG CCCCGACAAC CGCAGCCTCA ACCTGTCGAA CACAGTGGCC GTGGTGGTCT TCGAGGCGTG GCGGCAGAAC GGATTCGCGG GCGGCGCCTG A
|
Protein sequence | MFNVVLVEPE IPPNTGNVIR LCANTGAQLH LIEPLGFPLE DARMRRAGLD YHEYATMRVH ASWDAFLRDA QPDPARMFAL TTRGSTPFAG LAFQPGDWFV FGSETRGLSE ERRAGFPPSQ RIRLPMRPDN RSLNLSNTVA VVVFEAWRQN GFAGGA
|
| |