Gene RSc0358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0358 
SymbolyibK 
ID1219161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp388696 
End bp389166 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content68% 
IMG OID637236715 
Productputative tRNA/rRNA methyltransferase protein 
Protein accessionNP_518479 
Protein GI17545077 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0219] Predicted rRNA methylase (SpoU class) 
TIGRFAM ID[TIGR00185] rRNA methylase, putative, group 2 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0648772 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAACG TCGTTCTCGT CGAGCCCGAA ATTCCGCCCA ACACGGGCAA TGTGATCCGG 
CTGTGCGCCA ACACCGGCGC GCAGCTGCAC CTGATCGAAC CACTCGGTTT TCCGCTCGAG
GATGCGCGCA TGCGCCGCGC CGGCCTGGAC TACCACGAAT ACGCCACGAT GCGCGTGCAC
GCGAGCTGGG ACGCGTTCCT GCGCGATGCG CAGCCCGACC CCGCGCGCAT GTTCGCGCTC
ACCACGCGCG GCTCGACGCC GTTCGCGGGA CTGGCGTTCC AGCCGGGCGA CTGGTTCGTG
TTCGGATCGG AAACGCGGGG CCTGTCGGAA GAGCGCCGCG CAGGGTTTCC GCCATCGCAG
CGCATCCGCC TGCCGATGCG CCCCGACAAC CGCAGCCTCA ACCTGTCGAA CACAGTGGCC
GTGGTGGTCT TCGAGGCGTG GCGGCAGAAC GGATTCGCGG GCGGCGCCTG A
 
Protein sequence
MFNVVLVEPE IPPNTGNVIR LCANTGAQLH LIEPLGFPLE DARMRRAGLD YHEYATMRVH 
ASWDAFLRDA QPDPARMFAL TTRGSTPFAG LAFQPGDWFV FGSETRGLSE ERRAGFPPSQ
RIRLPMRPDN RSLNLSNTVA VVVFEAWRQN GFAGGA