| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0357 |
|---|
| Symbol | gpsA |
|---|
| ID | 1219160 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 387661 |
|---|
| End bp | 388677 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637236714 |
|---|
| Product | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase |
|---|
| Protein accession | NP_518478 |
|---|
| Protein GI | 17545076 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.076782 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGATTT CCGTTCTGGG CGCGGGCGCC TGGGGCACGG CCCTGGCCAG CCACGCCGCG
CAATCGCACG ATGTCGTGCT GTGGGGCCGC GACGCGGCAC TGGTGGCCCA GATGGCGGCG
ACACGCGCCA ACGAGCGCTA CCTGCCGGGC ATCCCGCTGC ACGCATCGCT GCGTTTCGAG
GCGGAGATGT CGGCCGCGCT CGATCATGCC ACCGGGGAAG ACGCGCTGGT CGTGATCGCC
TCGCCGGTCG CGGGGCTGGC CGACCTGACG CGCGGCGTGG CCGCGCATGG CGGCGTGCGC
AACGTGATCT GGCTGTGCAA GGGCTTCGAC CCCGAGTCGG GCGCGCTGCC GCACGCCATT
GTGGCCGGCG TGCTGGCGCA GACCGGGCGC GCCGATCTGG CCACCGGTGC ACTGTCCGGC
CCGAGCTTCG CCAAGGAAGT CGCGCAGGGA CTGCCGTGCG CGATGACGGT GGCGTCGGCC
AGCACCGCGC TGTGCACGCG CACTCAGCGC GCTTTCCATC ACCATGCGAT GCGCGTCTAC
GCGAGCGACG ACCTCGTCGG CGTGGAAGTG GGCGGCGCGG TGAAGAACGT GCTGGCCATT
GCGACCGGCG CGGCGGATGG TCTGGGCCTG GGCCTCAATG CGCGCGCCGC GCTGGTGACG
CGCGGCCTGG CCGAGATGAC GCGGTTGGGC ACGGCACTGG GCGGCCGGCC GGAGACCTTC
ATGGGCCTGA CCGGCATGGG CGATCTGCTG TTGACCGCCA CCGGCGATCT CTCCCGCAAC
CGCACCGTCG GCATGCAGCT CGCGCAGGGG CGTTCGCTGG ATGAGATTCT GGCGCACCTC
GGCCATGTCG CCGAGGGTGT GCGCTGCGCA CGGGCGGTGG CGGCTCTTGC GCGCGCCAAG
GGCGTCGACA TGCCGATCAC CTTTGCCGTG TGCGAAGTCC TGTTCGATGG GCTGGCGCCG
TCGCGCGCCG TCGATCGCCT GCTGCAGCGC GACGCCAAGG CCGAATCCGT GCGCTGA
|
|---|
| Protein sequence | MRISVLGAGA WGTALASHAA QSHDVVLWGR DAALVAQMAA TRANERYLPG IPLHASLRFE
AEMSAALDHA TGEDALVVIA SPVAGLADLT RGVAAHGGVR NVIWLCKGFD PESGALPHAI
VAGVLAQTGR ADLATGALSG PSFAKEVAQG LPCAMTVASA STALCTRTQR AFHHHAMRVY
ASDDLVGVEV GGAVKNVLAI ATGAADGLGL GLNARAALVT RGLAEMTRLG TALGGRPETF
MGLTGMGDLL LTATGDLSRN RTVGMQLAQG RSLDEILAHL GHVAEGVRCA RAVAALARAK
GVDMPITFAV CEVLFDGLAP SRAVDRLLQR DAKAESVR
|
|---|
| |