| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0352 |
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| Symbol | |
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| ID | 1219155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 383542 |
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| End bp | 385191 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637236709 |
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| Product | putative carboxy-terminal processing protease transmembrane protein |
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| Protein accession | NP_518473 |
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| Protein GI | 17545071 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.77017 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.100187 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTATCC ATTTCTACGT TCCCAACGTC CGCCCTCGAC TCATGCGAAC TTCGCTCAAG
AACATCAGCC TGATCGCCAT CGGCCTCGTG ACCGGCGTGC TGGCGACGCT CCAGCTTTCC
GCCACCGCGC AGAACGCGAC GGTCGGGCCG CTGCCGCTGG AAAAGCTCCG GCTGATGGCC
GACATCTTCG GGCAGATCAA GCGCGAATAC GTCGAACCGG TGGACGACGA CAAACTGCTG
ACCGAAGCCA TCAAGGGCAT GGTCGCCAGC CTCGATCCGC ATTCGGCCTA CCTCGACAAG
AAAGACTTCC AGGAACTGCA GGAAGGCACC CAGGGCCGCT TCGCCGGACT GGGCATCGAA
ATCTCGCAGG AAGAAGGCCT GGTCAAGGTC ATCAACCCGA TTGAAGACAC GCCCGCCTTC
CGCGCCGGCG TCCAGCCGGG CGACCTGATC ACCCGCATCG ACGACAAGCC CGTGCGCGGC
ATGCCGCTGG AACAGGCGGT CAAGCGCATG CGCGGCGCCC CGGGCACCAA GGTCACGCTG
ACCATCTACC GCAAGAAGGA AGAGCGCACC TTCCCGCTCA CCATCACGCG CGCCGAAATC
CAGGTGCAAT CGGTCAAGGC CAAGCTGCTG GGCGACGGCA TCGCCTGGGT GCGCATCACC
AGCTTCCAGG AACGCACGGT ACCGGACCTG GCCAAGAAGC TGAATGACCT GGCACACCAA
GATGCGCGCC TCAAGGGCGT GATCCTCGAT CTGCGCAACA ACGGTGGCGG CGTGTTGCAG
GCGGCCGTGG GCGTATCGGC GGCGTTCCTG CCCCCGGACG TGACGGTGGT CTCGACCAAC
GGCCAGGTGC CGGACGCCAA GCGCGTGTAC AAGACGAGCT TCGCGAACTA CCGCCTGAGC
AATTTCGACA CCGATCCGCT GGTGAGCCTG GACCCCGAGT TCAAGACCGT GCCGATCGTG
GTGCTGACCA ACGCCTACAC CGCCTCGGCC TCCGAGATCG TGGCCGGCGC GCTGCAGGAT
CACCATCGCG CCAAGGTGAT GGGCAAGACC ACCTTTGGCA AGGGTTCGGT GCAGACGGTG
CGCCCGCTGT CGAACGACAC CGGCATCAAG CTGACCATCG CGTACTACTA CACGCCGTCG
GGCAAATCGA TCCAGGCCAA GGGCATCCGC CCCGACGTGC CGGTCGACCA GAGCCCCGAA
GGCGATCCGG ACGACGCGCT GATCACCCGC GAGATCGACA CCGAGCGCCA CCTGCACAAC
AAGCAGGAGT CGGAAGAACC CGAGATGACC GATCGCGAGA AGCGCCGCGT CGAAGAGCTG
CGCCGCCTGG AAGAAGAAAC CGCCAAGAAG ACGCCCGAGC AGCGCGAGAA GGAACGCAAC
AAGAAGCCGA TCGAGTTCGG CTCGACCGAC GACTTCATGT TGCAGCAGGC CGTCGCCGAG
CTGAAGGGCC AGCCGGTCAA GCGCTCCAAG TCGGTGCTGG AGGCCGCTGC GGCCGTCCCG
GACAAGGCGA CGAAATCGCC GGCCGCGAAG GAGTCGAGCG CACCGGCCAA GCTGCCCAAG
GGCAAGGCCG CTCCGGCATC CGAACCGGCC GCGCCCTCGG GTCCGGCCAG CGGTGTGATT
CCGGCACCGG AACCCACCGG CGCACGATAA
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| Protein sequence | MFIHFYVPNV RPRLMRTSLK NISLIAIGLV TGVLATLQLS ATAQNATVGP LPLEKLRLMA
DIFGQIKREY VEPVDDDKLL TEAIKGMVAS LDPHSAYLDK KDFQELQEGT QGRFAGLGIE
ISQEEGLVKV INPIEDTPAF RAGVQPGDLI TRIDDKPVRG MPLEQAVKRM RGAPGTKVTL
TIYRKKEERT FPLTITRAEI QVQSVKAKLL GDGIAWVRIT SFQERTVPDL AKKLNDLAHQ
DARLKGVILD LRNNGGGVLQ AAVGVSAAFL PPDVTVVSTN GQVPDAKRVY KTSFANYRLS
NFDTDPLVSL DPEFKTVPIV VLTNAYTASA SEIVAGALQD HHRAKVMGKT TFGKGSVQTV
RPLSNDTGIK LTIAYYYTPS GKSIQAKGIR PDVPVDQSPE GDPDDALITR EIDTERHLHN
KQESEEPEMT DREKRRVEEL RRLEEETAKK TPEQREKERN KKPIEFGSTD DFMLQQAVAE
LKGQPVKRSK SVLEAAAAVP DKATKSPAAK ESSAPAKLPK GKAAPASEPA APSGPASGVI
PAPEPTGAR
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