Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0335 |
Symbol | |
ID | 1219138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 367215 |
End bp | 367784 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637236692 |
Product | putative transmembrane protein |
Protein accession | NP_518456 |
Protein GI | 17545054 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGGTCA TGGCGAGGCG ATGGTGGAGC GGTGCCCTGG GCGCGTCGGC ATGTGCGCTG TTGCTGGCCT GTTCACCCAG GTACGACTGG CGTACGGTGC AGTCCGCCGA GGGCGGCTAC AGCGTCGACT ACCCGGGCAA GCCCACCGCC GAGGCCCGCC CTGTCATCAT CGCCGGCCAG CGGCTGCCGA TGACGATGCA GGCTGCCAGC ATCGACGGAA CGCTGTTTGC CGTGGGCGTG GTGGAACTGC CCGCGGACGA TCCGATCTGG CGCCAGAACG CGGTTGCCGC GCTGCGTGCC GGGCTCGCCG GCAATCTGCG CGGCCACGTC GCCGCCCGCG ACATCGCCGT CAAGAGCGCG GCACAGCCGC CGGTATCGCT GCCGGCCGTG GAGCTGGTGG CACAGGGCAC GGGTGGGGAC GATCCGGCGC CGCGCCGGCT GACCGCTCGC ATCGTCGCTG CCGGCCGGCA CGCCTACCAG GCCGTCGTGC TGGAATCGGG AGAGGCCGCG CGCGACACCC GCCAGCAGGA GCAGGTGGAT CAGTTTCTCG CCAGCTTCCA CCCGTACTGA
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Protein sequence | MAVMARRWWS GALGASACAL LLACSPRYDW RTVQSAEGGY SVDYPGKPTA EARPVIIAGQ RLPMTMQAAS IDGTLFAVGV VELPADDPIW RQNAVAALRA GLAGNLRGHV AARDIAVKSA AQPPVSLPAV ELVAQGTGGD DPAPRRLTAR IVAAGRHAYQ AVVLESGEAA RDTRQQEQVD QFLASFHPY
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