| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0334 |
|---|
| Symbol | |
|---|
| ID | 1219137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 366609 |
|---|
| End bp | 367124 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637236691 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_518455 |
|---|
| Protein GI | 17545053 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATCC CTACCGTCAC CCTGCGCGCG CTGCGCGCCG ACATCACCAC CCTGGCGTGC
GACGCCATCG TCAACGCAGC CAACAGTGCC CTGCTGGGGG GCGGGGGCGT GGACGGCGCC
ATCCACCGCG CCGCCGGACC GGAGCTGCTC GAGGCCTGCC GTGCCCTGCA CGGCTGCCGC
ACCGGCCAGG CCAAGATCAC ACCGGGCTTC CTGCTGCCCG CGCGCTACAT CATCCATACG
GTCGGCCCCA TCTGGCGCGG CGGCCGGCAG GACGAAGCGG CCCTGCTGGC GGCCTGTTAT
CGCAACAGCC TCGCGCTTGC CAAGCAGCAT GACGTGCGCA CCATCGCCTT TCCGTGCATC
AGCACGGGCG TCTACGGCTT TCCGCCGCAG TTGGCCGCGC CGATCGCCGT GCGCACGGTG
CGGGAGCACG GCGCCGACCT GGACGACATC GTGTTCTGCT GCTTCTCCGC GGCCGACCTG
GCGCTCTACG AGACGGCGCT GAACGAGGCG AGATGA
|
|---|
| Protein sequence | MPIPTVTLRA LRADITTLAC DAIVNAANSA LLGGGGVDGA IHRAAGPELL EACRALHGCR
TGQAKITPGF LLPARYIIHT VGPIWRGGRQ DEAALLAACY RNSLALAKQH DVRTIAFPCI
STGVYGFPPQ LAAPIAVRTV REHGADLDDI VFCCFSAADL ALYETALNEA R
|
|---|
| |