| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0331 |
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| Symbol | dctB2 |
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| ID | 1219134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 362536 |
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| End bp | 364533 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637236688 |
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| Product | C4-dicarboxylate transport sensor kinase transcription regulator protein |
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| Protein accession | NP_518452 |
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| Protein GI | 17545050 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCACG GCACCGAGCG GCTGATGGCC GGCGCGGCCC CGGAAGGCAC GGCGAGCCCG
TCCGCCGTTC ACCACCCGCC GATGTCCGAG CCCGATTTCC CGTTTTCCTC CGCCAGCCCG
CGCCGCGGCT TCGGGTGGCT GGTGGCGGCC GCTCTGGTGG CGGTGATGGC GCTGGTGTGC
GCGACGACCT TCGTGGTGAC CTGGAACCGC GGCCTGTCGC AGGCCCAGCA GGCCGCCGGC
GCCCGCGTCG ACCGCTATGC CGCCAACCTC AAGAGCACGC TCGACCGCTA CGAGTACCTG
CCGGCGCTGG TCGCGCTGCA TCCGTTCATC CACGACCTGC TGGCCCACCC GACGCCCGAC
AACGTCGCGC GCGCCAACCA CTACCTGCGC GAGGTCAACG ACCGCGCCCG CGCCACCGCC
ACCTACGTGA TCGCCCCGAC CGGCCTGGCC CTGGCGGCAT CCAACTACAA CCTGCCCGAT
AGCTTCGTCG GCGCCGAATA CCTGTTCCGG CCGTATTTCC AGCAGGCGGC CGCCGGACAC
GTCGGGCGCT TCTACGGCAT CGGCATCACG CGCGAGGAGC CCGGCTACTA CATCTCGCAG
CCGGTGATGC AGAACGGCAG CGTGATCGGC GTGACGGTGG TCAAGCTCAA CCTGGAGTGG
TTCGGCCGCG CCAGCCATGA TGCCTCCGAG CCGGTGATGG TGGCCGACGA GAACGGCGTG
ATCTTCCTGT CGTCGGTGCC GGCGTGGCAG TACCGCACGG TCGAGCCGCT CACGCCCGAG
CTGCAGGCGC AGCTGCAGGC GACCCGCCAG TACTTCCGCA AGCAGATCAC GCCGCTGCCG
CTGCAGCCCG AGATGCCGGC CTTCCTGAAG CTGGTCGGGC GCATGCCCGA CGGCGCGCGT
CTGGTGCGCG TCGGCGACCG CATCAACGCG CCGCGCTACC TGCTGGTATC GCGCGAGCTG
GTCGAGCCCG ACTGGCAGCT GATGTACCTG ACGCCCATCG ATCCGGTGAT GGGCGCGGCG
CGCAGCGCGA CGGTCGCCGC GGCCTTCGCC TTCGCCTTCG TCTGCCTGCT GCTGTTCTAT
TGGCGCCAGC GCCGGCTGCG CCTGAGGGAG ATGCTGCGCG GCCGCCGCCT GCTCGAAGCG
GCCTACGACC AGCTGGAGCG CCGCGTCGAA GACCGCACCG CCGACCTGAT GGCAACCAAC
GAGCAACTGC AGCACGAGAT CGTCGACCGC ACCCGCGCCG AAGCCGAGCT GCGCGCCACG
CAGGACGAAC TCGTGCAGGC CAGCAAGCTT GCCGCCCTGG GGCAGATGGC GGCCGGCATC
ACGCACGAGC TCAACCAGCC GCTGGCTGCG CTGCGCACCT TCTCCGACAA CACGCGCATC
CTGCTGGAGC GCGGCCAGCA CGGCGCCGCC GCCGACAACC TGCGCGCCAT CGCCGACCTG
ACCGAACGCA TGGGCAAGAT CACCGCGCAG CTCAAGCTGT TTGCCGGCCG CTCGCGCCGC
AGGCTTGCCG ATGTGCAGGT GCGCGTGGCG CTCGACCACG TGCTGGCGCT GCTGCGCCCG
CGCCTGGCCG AGGTGGAGAC CGCGCTGCAC TGGCGCCTGC CCGAGGCCGC ATGCGTGGTC
CGCGCGGATG AGCTCAAGCT GGAGCAGGTG CTGATCAACC TGATCGGCAA CGCGCTCGAC
GCCATCGCCG CCAACGATCT GCCGCGCCCC GGCCGCATCG ACATCGACAT CGGCCCGGCC
GATGGCGCGC CCGCGCAGCT GTGCATCGTC GTGCGCGACA ATGGCCCCGG CATTGCGGCC
GATGCCATGC CGCACCTGTT CGAACCGTTC TTCACCACCA AGGAGATCGG CCAGGGCCTC
GGCCTGGGGC TGGCGATTTC CACCAGCATC GCGCGCGACT TCGGCGGCTC GCTGTCGGCG
GCCAATGTGC CGGGCGGCGG CGCCCAGTTC ACGCTGTCGC TGGTCCGCGC CGAGGTGGTG
CCGGCCGCGA CGCCCTGA
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| Protein sequence | MRHGTERLMA GAAPEGTASP SAVHHPPMSE PDFPFSSASP RRGFGWLVAA ALVAVMALVC
ATTFVVTWNR GLSQAQQAAG ARVDRYAANL KSTLDRYEYL PALVALHPFI HDLLAHPTPD
NVARANHYLR EVNDRARATA TYVIAPTGLA LAASNYNLPD SFVGAEYLFR PYFQQAAAGH
VGRFYGIGIT REEPGYYISQ PVMQNGSVIG VTVVKLNLEW FGRASHDASE PVMVADENGV
IFLSSVPAWQ YRTVEPLTPE LQAQLQATRQ YFRKQITPLP LQPEMPAFLK LVGRMPDGAR
LVRVGDRINA PRYLLVSREL VEPDWQLMYL TPIDPVMGAA RSATVAAAFA FAFVCLLLFY
WRQRRLRLRE MLRGRRLLEA AYDQLERRVE DRTADLMATN EQLQHEIVDR TRAEAELRAT
QDELVQASKL AALGQMAAGI THELNQPLAA LRTFSDNTRI LLERGQHGAA ADNLRAIADL
TERMGKITAQ LKLFAGRSRR RLADVQVRVA LDHVLALLRP RLAEVETALH WRLPEAACVV
RADELKLEQV LINLIGNALD AIAANDLPRP GRIDIDIGPA DGAPAQLCIV VRDNGPGIAA
DAMPHLFEPF FTTKEIGQGL GLGLAISTSI ARDFGGSLSA ANVPGGGAQF TLSLVRAEVV
PAATP
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