Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0325 |
Symbol | |
ID | 1219128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 357103 |
End bp | 358065 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637236682 |
Product | DNA-binding transcriptional activator GcvA |
Protein accession | NP_518446 |
Protein GI | 17545044 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGAAA TCCGTGAGCC GATGCGGCTG CCGCCGCTGG GGGCGTTGCG CGTATTCGAG GCGGCCGCGC GTTACGAGAG CTTCTCGCGC GCGGCCATTG AGCTGTTCGT CACGCACGGC GCGGTCAGCC ACCAGATGCG CACACTGGAG GAGGAGCTGG GCGTGCCGCT GTTCGAGCGG CGCGGCAAGC GCGTCACCCT GACCCACGCC GGGCGCACCT ACGCCGAGCG CGTGCGCGAC GCGCTCGACC AGATCGCCCA GGCCACGCAC CAGCTGCGCG CGGGCAACCG CGACAATCGC CTGACCATCA GCACCATGCC GTCGTTCGCG GCGCGCTGGC TGACCCCGCA CATCGGCACC TTCATCGAGC GGCATCCGGA GCTGGAGGTG GAGCTGTTCT CCAGCCCGGC GCTGGTCGAC TTCGCGCGCG AGGAGGTGGA CGTGGCGCTG CGCATGGGCT CGGGCAACTA CCCCGGCCTG TACGTGGAGA CGCTGCTCGA CGACGTGTTC TTCCCGATCT GCAGCCCGAC GTTCAACGGC GGCCGGCTGC CGCGCACGCC TGCCGAGATG GCCGGCATGA CGCTGCTGCG CAGCGAGGGC GAGCAATGGA AGCCGTGGTT CGACGCGGCC GGCGTGGAGG GCTTTCCCGA GCCGCGCGCC GGGCTGATGT TCCAGGACTC GTCGCTGCTG CTGCAAGCGG CGGCGGCCGG GCAGGGCATT GCGCTGATCC GCCCGACGCT GGCGTTCAAC GACCTGATGG CCGGCCGTGT CGTGCGCCTG TTCGACGTGA CGATCCCCTG CCCGTGGAAC TACTACTTCG TCTGTCCGCA CGGCGCGCTG CAGACGCCCA AGATGCAGGC TTTCCGCGCG TGGCTGCTGC CGGAGATCGC CGCCTTCAAG CTCAAGCTGG ACCGGCTGAT GAGCGACACC ACGGTGAGCC TAGGGCACGT CGCGAAGGGA TAA
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Protein sequence | MAEIREPMRL PPLGALRVFE AAARYESFSR AAIELFVTHG AVSHQMRTLE EELGVPLFER RGKRVTLTHA GRTYAERVRD ALDQIAQATH QLRAGNRDNR LTISTMPSFA ARWLTPHIGT FIERHPELEV ELFSSPALVD FAREEVDVAL RMGSGNYPGL YVETLLDDVF FPICSPTFNG GRLPRTPAEM AGMTLLRSEG EQWKPWFDAA GVEGFPEPRA GLMFQDSSLL LQAAAAGQGI ALIRPTLAFN DLMAGRVVRL FDVTIPCPWN YYFVCPHGAL QTPKMQAFRA WLLPEIAAFK LKLDRLMSDT TVSLGHVAKG
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