Gene RSc0325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0325 
Symbol 
ID1219128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp357103 
End bp358065 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content70% 
IMG OID637236682 
ProductDNA-binding transcriptional activator GcvA 
Protein accessionNP_518446 
Protein GI17545044 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAAA TCCGTGAGCC GATGCGGCTG CCGCCGCTGG GGGCGTTGCG CGTATTCGAG 
GCGGCCGCGC GTTACGAGAG CTTCTCGCGC GCGGCCATTG AGCTGTTCGT CACGCACGGC
GCGGTCAGCC ACCAGATGCG CACACTGGAG GAGGAGCTGG GCGTGCCGCT GTTCGAGCGG
CGCGGCAAGC GCGTCACCCT GACCCACGCC GGGCGCACCT ACGCCGAGCG CGTGCGCGAC
GCGCTCGACC AGATCGCCCA GGCCACGCAC CAGCTGCGCG CGGGCAACCG CGACAATCGC
CTGACCATCA GCACCATGCC GTCGTTCGCG GCGCGCTGGC TGACCCCGCA CATCGGCACC
TTCATCGAGC GGCATCCGGA GCTGGAGGTG GAGCTGTTCT CCAGCCCGGC GCTGGTCGAC
TTCGCGCGCG AGGAGGTGGA CGTGGCGCTG CGCATGGGCT CGGGCAACTA CCCCGGCCTG
TACGTGGAGA CGCTGCTCGA CGACGTGTTC TTCCCGATCT GCAGCCCGAC GTTCAACGGC
GGCCGGCTGC CGCGCACGCC TGCCGAGATG GCCGGCATGA CGCTGCTGCG CAGCGAGGGC
GAGCAATGGA AGCCGTGGTT CGACGCGGCC GGCGTGGAGG GCTTTCCCGA GCCGCGCGCC
GGGCTGATGT TCCAGGACTC GTCGCTGCTG CTGCAAGCGG CGGCGGCCGG GCAGGGCATT
GCGCTGATCC GCCCGACGCT GGCGTTCAAC GACCTGATGG CCGGCCGTGT CGTGCGCCTG
TTCGACGTGA CGATCCCCTG CCCGTGGAAC TACTACTTCG TCTGTCCGCA CGGCGCGCTG
CAGACGCCCA AGATGCAGGC TTTCCGCGCG TGGCTGCTGC CGGAGATCGC CGCCTTCAAG
CTCAAGCTGG ACCGGCTGAT GAGCGACACC ACGGTGAGCC TAGGGCACGT CGCGAAGGGA
TAA
 
Protein sequence
MAEIREPMRL PPLGALRVFE AAARYESFSR AAIELFVTHG AVSHQMRTLE EELGVPLFER 
RGKRVTLTHA GRTYAERVRD ALDQIAQATH QLRAGNRDNR LTISTMPSFA ARWLTPHIGT
FIERHPELEV ELFSSPALVD FAREEVDVAL RMGSGNYPGL YVETLLDDVF FPICSPTFNG
GRLPRTPAEM AGMTLLRSEG EQWKPWFDAA GVEGFPEPRA GLMFQDSSLL LQAAAAGQGI
ALIRPTLAFN DLMAGRVVRL FDVTIPCPWN YYFVCPHGAL QTPKMQAFRA WLLPEIAAFK
LKLDRLMSDT TVSLGHVAKG