Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0314 |
Symbol | |
ID | 1219117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 345405 |
End bp | 346301 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637236671 |
Product | ABC transporter ATP-binding protein |
Protein accession | NP_518435 |
Protein GI | 17545033 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGAC CGCGCCATCC GCATGTCGAG CCTTCGCGCG CCGGCGTGAC CGGTCCCGCA GCCGGGCCGC TCACGCCGGC GCGCGAACGC GTGATCCAGG TGCGCAGCGT CACCAAGCGC TACGGCGACG TGACGGTGCT CGACAACATC GACCTGGACG TGTTCCGGGG CGAGGTGCTG TCGATCGTGG GCGGCTCGGG CAGCGGCAAG ACGACCCTGC TGCGGCAGGT GGTCGGGCTG GAGAAGCCGA CGTCGGGCAC CATCCACATC TTCGGCGAGG AGCTGACCTG CCAGGTGGGC AACGAACTGC AGTCGATGCG CAACCGCTGG GGCATGCAGT TCCAGCACGG CGCGCTGTTC TCGGCGCTGT CGGTGATCGA CAACGTGGCG CTGCCGATGC GCGAGCTGCG CACGCTGCCC GATGCCTTCG TCGCGCGCGT GGCCATGCTC AAGCTGCAGA TGGTGGGCCT GAAGGCGAGC GATGCCGACA AGATGCCCGC CGACCTGTCG GGCGGCATGA TCAAGCGGGT GGCGCTGGCG CGCGCGCTGT CGCTCGAGCC GGAGCTGGTC TTCCTCGACG AGCCGACCGC CGGGCTGGAC CCGCGCGCCT CCGACGACTA TGTCGCGCTG ATCCGCGAGC TGCGCCGCGA GCTCGGCCTG ACCGTGGTGA TGGTGACGCA CGACCTCGAC ACGCTGGTGG CGCTGTCCGA CCGCATTGCC GTGCTGGCCG ACCGCAAGGT GCTGGCCGCC AAGCCGGTCG ACCAGATCAT CCAGATCGAC CACCCGTTCA TCAAGGAATA CTTCCTGGGC GAGCGGGGCA AGCGGGCCCT GATGGCGCTG GGCCCCGAGA TGACGGAAGC GGTGGCCGCG GCCAGCCTTT CGATGCAGGA GGACTGA
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Protein sequence | MTRPRHPHVE PSRAGVTGPA AGPLTPARER VIQVRSVTKR YGDVTVLDNI DLDVFRGEVL SIVGGSGSGK TTLLRQVVGL EKPTSGTIHI FGEELTCQVG NELQSMRNRW GMQFQHGALF SALSVIDNVA LPMRELRTLP DAFVARVAML KLQMVGLKAS DADKMPADLS GGMIKRVALA RALSLEPELV FLDEPTAGLD PRASDDYVAL IRELRRELGL TVVMVTHDLD TLVALSDRIA VLADRKVLAA KPVDQIIQID HPFIKEYFLG ERGKRALMAL GPEMTEAVAA ASLSMQED
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