Gene RSc0314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0314 
Symbol 
ID1219117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp345405 
End bp346301 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content69% 
IMG OID637236671 
ProductABC transporter ATP-binding protein 
Protein accessionNP_518435 
Protein GI17545033 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGAC CGCGCCATCC GCATGTCGAG CCTTCGCGCG CCGGCGTGAC CGGTCCCGCA 
GCCGGGCCGC TCACGCCGGC GCGCGAACGC GTGATCCAGG TGCGCAGCGT CACCAAGCGC
TACGGCGACG TGACGGTGCT CGACAACATC GACCTGGACG TGTTCCGGGG CGAGGTGCTG
TCGATCGTGG GCGGCTCGGG CAGCGGCAAG ACGACCCTGC TGCGGCAGGT GGTCGGGCTG
GAGAAGCCGA CGTCGGGCAC CATCCACATC TTCGGCGAGG AGCTGACCTG CCAGGTGGGC
AACGAACTGC AGTCGATGCG CAACCGCTGG GGCATGCAGT TCCAGCACGG CGCGCTGTTC
TCGGCGCTGT CGGTGATCGA CAACGTGGCG CTGCCGATGC GCGAGCTGCG CACGCTGCCC
GATGCCTTCG TCGCGCGCGT GGCCATGCTC AAGCTGCAGA TGGTGGGCCT GAAGGCGAGC
GATGCCGACA AGATGCCCGC CGACCTGTCG GGCGGCATGA TCAAGCGGGT GGCGCTGGCG
CGCGCGCTGT CGCTCGAGCC GGAGCTGGTC TTCCTCGACG AGCCGACCGC CGGGCTGGAC
CCGCGCGCCT CCGACGACTA TGTCGCGCTG ATCCGCGAGC TGCGCCGCGA GCTCGGCCTG
ACCGTGGTGA TGGTGACGCA CGACCTCGAC ACGCTGGTGG CGCTGTCCGA CCGCATTGCC
GTGCTGGCCG ACCGCAAGGT GCTGGCCGCC AAGCCGGTCG ACCAGATCAT CCAGATCGAC
CACCCGTTCA TCAAGGAATA CTTCCTGGGC GAGCGGGGCA AGCGGGCCCT GATGGCGCTG
GGCCCCGAGA TGACGGAAGC GGTGGCCGCG GCCAGCCTTT CGATGCAGGA GGACTGA
 
Protein sequence
MTRPRHPHVE PSRAGVTGPA AGPLTPARER VIQVRSVTKR YGDVTVLDNI DLDVFRGEVL 
SIVGGSGSGK TTLLRQVVGL EKPTSGTIHI FGEELTCQVG NELQSMRNRW GMQFQHGALF
SALSVIDNVA LPMRELRTLP DAFVARVAML KLQMVGLKAS DADKMPADLS GGMIKRVALA
RALSLEPELV FLDEPTAGLD PRASDDYVAL IRELRRELGL TVVMVTHDLD TLVALSDRIA
VLADRKVLAA KPVDQIIQID HPFIKEYFLG ERGKRALMAL GPEMTEAVAA ASLSMQED