Gene RSc0309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0309 
Symbolaut 
ID1219112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp340940 
End bp341440 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content69% 
IMG OID637236666 
Productputative transferase protein 
Protein accessionNP_518430 
Protein GI17545028 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain
[TIGR02199] rfaE bifunctional protein, domain II 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACTC TCCGCCAGCC CGCGCCCATG TTCGAACAGA AGCTCTGCGA CTCCGCCGAC 
GTGGAGGCCC GCGTGCGCGC CTTGCCGCGC CCGCTGGTCT TCACCAACGG CGTGTTCGAC
ATCCTGCATC GCGGGCACGT GACCTATCTT GCGCAGGCGC GCGCGCTGGG GGCCTCGCTG
GTGGTGGGCG TGAACACCGA CGCCTCGGTG CGCATGCTGG GCAAGGGCGA CGATCGTCCG
CTCAATGCCG AGGTGGATCG CCTCGCGGTA CTGGCCGCGC TGGAGTCGGT GAGCCTGGTG
GTGCTGTTCG CCGAACGCAC GCCGGTCGAG CTGATCCGGC GCGTGCGCCC CGACATCTAC
GTCAAGGGCG GCGACTACGA CATCGACACG CTGGAAGAAA CCCGCGTCGT GCGCGGCTGG
GGCGGGACGG CCTTGGCGAT TCCGTTCGAC CACGACCGCT CGACGACGCA GCTGCTCAAG
CGCGTGCGCG CGACGTCCTG A
 
Protein sequence
MSTLRQPAPM FEQKLCDSAD VEARVRALPR PLVFTNGVFD ILHRGHVTYL AQARALGASL 
VVGVNTDASV RMLGKGDDRP LNAEVDRLAV LAALESVSLV VLFAERTPVE LIRRVRPDIY
VKGGDYDIDT LEETRVVRGW GGTALAIPFD HDRSTTQLLK RVRATS