| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0294 |
|---|
| Symbol | metHb |
|---|
| ID | 1219097 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 325742 |
|---|
| End bp | 328459 |
|---|
| Gene Length | 2718 bp |
|---|
| Protein Length | 905 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637236651 |
|---|
| Product | 5-methyltetrahydrofolate--homocysteine methyltransferase |
|---|
| Protein accession | NP_518415 |
|---|
| Protein GI | 17545013 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1410] Methionine synthase I, cobalamin-binding domain |
|---|
| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACC ACCTCATGCG CCTCTCCGGC CTCGAACCGT TCAACATCGG CGAGGACACG
CTGTTCGTCA ACGTCGGCGA ACGCACCAAC GTCACCGGAT CCAAGGCGTT CGCGCGCATG
ATCCTCAACA GCCAGTTCGA CGAGGCGCTC GCCGTGGCAC GCCAGCAGGT CGAGAACGGC
GCGCAGGTCA TCGACATCAA CATGGACGAG GCCATGCTCG ACTCCAAGGC GGCGATGGTG
CGCTTCCTGA ACCTGATCGC CTCGGAGCCG GACATCGCGC GCGTGCCGAT CATGATCGAC
TCGTCCAAGT GGGAGGTGAT CGAGGCCGGC CTGAAGTGCG TGCAGGGCAA GGCCATCGTC
AACTCGATCT CGCTCAAGGA AGGCGAGGAA CAGTTCGCCC ACCACGCCAA GCTGATCAAG
CGCTACGGCG CCGCCGCCGT GGTGATGGCC TTCGACGAGC AGGGCCAGGC CGACACGTTC
GCGCGCAAGA CCGAGATCTG CAAGCGCAGC TATGACTTCC TCGTGAACCA GGTCGGCTTT
GCGCCGGAAG ACATCATCTT CGATCCGAAC ATCTTCGCGG TCGCCACCGG CATCGAGGAG
CACAACAACT ACGCCGTCGA CTTCATCGAG GCCACGCGCT GGATCAAGCA GAAATTGCCG
CACGCCAAGG TGAGCGGCGG CGTGTCGAAC GTCTCGTTCT CGTTCCGCGG CAACGACGTG
GTGCGCGAGG CCATCCACAC CGTGTTCCTG TACCACGCCA TCGGTGCGGG CATGGACATG
GGCATCGTCA ACGCGGGCCA GTTGGGCGTG TACGAGAACC TCGCCCCCGA ACTGCGCGAG
CGCGTGGAAG ACGTGGTGCT CAACCGCCGC CCGGATGCGA CCGACCGCCT GCTGGAAATT
GCCGACCGCT ACAAGGGCGG CGGCGCCAAG CGCGAGGAGA ACCTCGCCTG GCGCCAGGAG
CCGGTGGAAA AGCGCCTGGC CCACGCGCTC GTGCACGGCA TCACCGACTA CGTGGTCGAA
GACACCGAGG AAGTTCGCCA GAAGATCTTT GCCGCCGGCG GCCGCCCGAT CCAGGTGATC
GAGGGCCCGC TGATGGACGG CATGAACATC GTCGGCGATC TGTTCGGCGC GGGCAAGATG
TTCCTGCCGC AGGTGGTGAA ATCCGCCCGC GTGATGAAGC AGGCGGTGGC CCACCTGATC
CCGTTCATCG AGGAAGAGAA GCGGCAGATC GCGGCCGCCG GCGGCGACGT GCGCTCGCGC
GGCAAGATCG TCATCGCCAC CGTGAAGGGC GACGTGCACG ACATCGGCAA GAACATCGTC
ACCGTCGTGC TCCAGTGCAA CAACTTCGAA GTCGTGAACA TGGGCGTGAT GGTCCCGTGC
AACGAGATCC TGGCCAAGGC GAAGGTCGAG GGCGCGGACA TCATCGGCCT GTCGGGCCTG
ATCACACCGT CGCTGGAAGA GATGGCCTAC GTGGCCTCCG AGATGCAGCG CGACGAGTAC
TTCCGCGTGA AGAAGATCCC GCTGCTGATC GGTGGCGCGA CCACGAGCCG CGTGCACACC
GCCGTGAAGA TCGCGCCCAA TTACGAAGGC CCGGTCGTGT ACGTGCCCGA CGCCTCGCGC
TCGGTGAGCG TGGCCTCCAG CCTGCTGTCC GACGAGGCCG CCGCGCGCTA CATCGAAGAG
CTGCACGCCG ACTACGACCG CATCCGCACC CAGCACGCCA GCAAGAAAGC CATGCCGATG
GTGTCGCTGG CCGCCGCGCG CGCCAACAAG ACCCGGATCG ACTGGTCGAA CTACACGCCG
CCCAAGCCCA AGTTCGTCGG CCGCCGCGTG TTCCGCAACT ACGACCTGAA CGAGCTCGCG
CAGTACATCG ACTGGGGCCC GTTCTTCCAG ACGTGGGACC TGGCCGGCAA ATTCCCCGAC
ATCCTCAACG ACGCGATCGT CGGCGAATCG GCCCGCCGCG TGTTCTCCGA CGGCAAGAGC
ATGCTCGCGC GCCTGATCGC CGGACGCTGG CTGACGGCCA ACGGCGTGAT CGCGCTGCTG
CCGGCCAACA CCGTCAACGA CGACGACATC GAGATCTACA CCGACGAGAC CCGCTCGGAA
GTCGCCCTCA CCTGGCGCAA CATCCGCCAG CAGAGCGAGC GCCCGATCAT CGACGGCGTG
ATGCGCCCGA ACCGCTGCCT GGCGGACTTC ATCGCCCCCA AGGACACCGG CATCGCCGAT
TACATCGGCC TCTTCGCGGT GACGGGCGGC ATCGGGATCG ACAAGCGCGA AGCCGCCTTC
GAAGCCGACC ACGACGACTA CAGCGCGATC ATGCTCAAGG CCCTGGCCGA CCGCTTCGCC
GAAGCCTTCG CCGAGTGCCT GCACGCCCGT GTGCGCCGCG ACCTGTGGGG CTACGCGCAG
GACGAAACGC TCGACAACGA CGCGCTGATC CGCGAGGAAT ACCGCGGCAT CCGCCCGGCG
CCCGGCTACC CGGCCTGCCC GGAGCACACC GTCAAGCGCG ACCTGTTCCG CGTGCTCGAC
GCGCAGGAGA TCGGCATGAA CCTGACCGAG GCGCTGGCGA TGACACCGGC CGCGTCGGTC
TCGGGCTTCC AGCTGTCGCA CCCGGACAGC ACGTACTTCA CGATCGGCAA GATCGGCCAG
GACCAGGTGG ACGACATGGC CGCGCGCAGC GGGGAAGACC GCCGCAATGT GGAGCGCGCC
CTGGCACCCA ACCTGTAA
|
|---|
| Protein sequence | MTDHLMRLSG LEPFNIGEDT LFVNVGERTN VTGSKAFARM ILNSQFDEAL AVARQQVENG
AQVIDINMDE AMLDSKAAMV RFLNLIASEP DIARVPIMID SSKWEVIEAG LKCVQGKAIV
NSISLKEGEE QFAHHAKLIK RYGAAAVVMA FDEQGQADTF ARKTEICKRS YDFLVNQVGF
APEDIIFDPN IFAVATGIEE HNNYAVDFIE ATRWIKQKLP HAKVSGGVSN VSFSFRGNDV
VREAIHTVFL YHAIGAGMDM GIVNAGQLGV YENLAPELRE RVEDVVLNRR PDATDRLLEI
ADRYKGGGAK REENLAWRQE PVEKRLAHAL VHGITDYVVE DTEEVRQKIF AAGGRPIQVI
EGPLMDGMNI VGDLFGAGKM FLPQVVKSAR VMKQAVAHLI PFIEEEKRQI AAAGGDVRSR
GKIVIATVKG DVHDIGKNIV TVVLQCNNFE VVNMGVMVPC NEILAKAKVE GADIIGLSGL
ITPSLEEMAY VASEMQRDEY FRVKKIPLLI GGATTSRVHT AVKIAPNYEG PVVYVPDASR
SVSVASSLLS DEAAARYIEE LHADYDRIRT QHASKKAMPM VSLAAARANK TRIDWSNYTP
PKPKFVGRRV FRNYDLNELA QYIDWGPFFQ TWDLAGKFPD ILNDAIVGES ARRVFSDGKS
MLARLIAGRW LTANGVIALL PANTVNDDDI EIYTDETRSE VALTWRNIRQ QSERPIIDGV
MRPNRCLADF IAPKDTGIAD YIGLFAVTGG IGIDKREAAF EADHDDYSAI MLKALADRFA
EAFAECLHAR VRRDLWGYAQ DETLDNDALI REEYRGIRPA PGYPACPEHT VKRDLFRVLD
AQEIGMNLTE ALAMTPAASV SGFQLSHPDS TYFTIGKIGQ DQVDDMAARS GEDRRNVERA
LAPNL
|
|---|
| |