| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0289 |
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| Symbol | vsrA |
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| ID | 1219092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 321920 |
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| End bp | 323344 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637236646 |
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| Product | transmembrane sensor kinase vsrA transcription regulator protein |
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| Protein accession | NP_518410 |
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| Protein GI | 17545008 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.79349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGTCAT CTCTGCGCTC CACCCTGCTG CTTGCCGGCG GCATCCTGCT GACGCTGGGC
GTGCTGATTG CGTCCGAGAC GGGCAACATT CGCTTGAGCC AGGGCTACCG GCAGGTGATC
CAGTCGCAGC AGGCCGAAAC CGCCATCAAT GAACTGCTCG CCGAACTCGT CAACGCGGAG
GCCGGTCAGC GCGGCTTCCT GCTCACGGGC AAGGACGAGT ACCTCGATCC CTACAACAAG
GCCATCCCGC ACATCCACGC GCTGATGGCG GAAATCCGCG ACCACTACGC CAACGATCCC
GAAGCGCTGA AGCTGTTCTC CGATACCGCG CTGCAGGTCA GCCGCAAGCT CACCGAGATG
GAGCTCACGC TGATCTACGG CAAGCGCGAC CTGGAGGTGG CGCTGGACCT GATCCGCACG
GATTTCGGCA AGGCGTCGAT GGAGGCGGTG CGCCAGGGCC TGGACCGACT GCGCCAGCGC
GAGATCGGTA CGGTGGCGCG CAGCCTGGAG CACGCCGAGC GCGATCTGGC GCTGTCGCGC
TACGGCATCG CGCTGATCAC CGCGGTCAAC ATCATCCTGC TGGTGGTGCT GGGCATGCAG
CACGCCAGGC GCCTGGCCGC CACCGAGCGG GAGCGCGACA AGCTCGAAGA GGAAAGCCAG
AAGCTCGACC GCATGGTGCG CGAGCGCACG CGGCAGCTGT CGGACCTCGC CGCCCACCTG
CAGCGTGTGA CCGAGGACGA GAAGACGCGC CTGGCGCGCG AACTGCACGA TGAGCTGGGC
GCCCTCCTGA CCGCCACCAA GATGGACCTG CACTGGCTGC GCTCGCGCAT CACGGTCTCC
GAGCCGGCCG TGGCGGACAA GATCACGCGC GTGATGGCCC ACGTCGACCA GGGCATCCAG
ATCAAGCGCC GCCTGATCGA AGACCTGCGG CCGACCATCC TGCTCAATCT GGGCCTGGCC
GAGGCCATCA CGCAGCTGAC CGAAGACGTC GGCACGCGCA ATCAGTGGCA GACCGAGGTC
AGCCTGCCCG ACGAGATGCC CAAGCTCACC GACGACGCGG CCATCGCGCT GTACCGCATC
GTGCAGGAGT CGCTGACCAA CGCCTCGAAG TATGCGCACG CGACCATCGT CTCCGTGGCG
CTGGATGCGA GCGAGGAGGG CGTGCGGCTG CGCGTGCGCG ACAACGGCCG CGGCTTCCCG
GCCGACCTCG AGCGCCGGCG CATGGTCGGC CATCATGGCC TGCTGGGCAT GGAGCAGCGC
GCCATCGCGC TGGGCGGCAC ACTGACGATC GACTCGACGC CGGGCGGCGG TGTCACCATC
ATCGTCGAGC TGCCGCCGAC CGATGCGGTG GTCGACCGCG GCGATGCCGG CAACGGGCCG
GCAGGGGACA TTCCCTTGGC AGGCAAGGGC AACGCGCTGG TCTGA
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| Protein sequence | MRSSLRSTLL LAGGILLTLG VLIASETGNI RLSQGYRQVI QSQQAETAIN ELLAELVNAE
AGQRGFLLTG KDEYLDPYNK AIPHIHALMA EIRDHYANDP EALKLFSDTA LQVSRKLTEM
ELTLIYGKRD LEVALDLIRT DFGKASMEAV RQGLDRLRQR EIGTVARSLE HAERDLALSR
YGIALITAVN IILLVVLGMQ HARRLAATER ERDKLEEESQ KLDRMVRERT RQLSDLAAHL
QRVTEDEKTR LARELHDELG ALLTATKMDL HWLRSRITVS EPAVADKITR VMAHVDQGIQ
IKRRLIEDLR PTILLNLGLA EAITQLTEDV GTRNQWQTEV SLPDEMPKLT DDAAIALYRI
VQESLTNASK YAHATIVSVA LDASEEGVRL RVRDNGRGFP ADLERRRMVG HHGLLGMEQR
AIALGGTLTI DSTPGGGVTI IVELPPTDAV VDRGDAGNGP AGDIPLAGKG NALV
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