Gene RSc0281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0281 
Symbol 
ID1219084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp314264 
End bp315343 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content70% 
IMG OID637236638 
Producthypothetical protein 
Protein accessionNP_518402 
Protein GI17545000 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.18209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGC TCGAACACCA ACTCGACTAT CCCCTGGGCG ACACGCTGCC CGCAGGCGGC 
ATCCGCCACC AGGTCGCGCC CGGCATCTAC TGGCTGCGCA TGCCGCTGCC GTTCGCGCTG
GACCACATCA ACCTGTGGCT GCTGCGCGAT CGCCAGGACG GCCAGGACGG CTGGACCATC
GTCGACTGCG GCATCAACCA CGAAGCCATC CGCGCGTACT GGGAAACCCT CTTCGCCGAC
GGGCTCGACG GCCTGCCCGT GCTGCGCGTG CTGGTCACGC ACTGCCATCC CGACCACGTC
GGCCTGTCGC GCTGGTTGTG CGAAGGCGGC GACCACCAAC GCTGGAACGT GCGCCTGTGG
ATGAGCCTGG GCGATTACGC CTTCGCCCGC ATGCTGGTGG GCGGCACCGG CGCGTCCAAT
GCCGGGGGCG AGTCCGCCGC GCGCCATTTC GCCCGCCACG GCCTGACCGA CGCCGAGGCC
GTCGAGCGCA TCCGCAACCG CAAGGACTAC TACAGCACGC TGGTGCCGGG CGTGCCCGAG
CAGTACCGCC GCATCATGGA CGGCCAGGTC ATCGCGATCG GCCCGCACCG CTGGCGTGTC
ATCACCGGCT TCGGCCACGC GCCCGAGCAC GTCGCGCTCT ACAGCGAAGA TGCCGGCGTG
CTGATCTCCG GCGACATGGT GCTGCCGCGC ATCTCCACCA ACGTCAGCGT GTTCGACATC
GAGCCCGAGG CCGATCCGCT CACGCTGTAT CTCACCTCGC TCGACAAGTA CGAGGCGTTG
CCGGAAGACG TGCTGATCCT GCCCTCGCAC GGGCGGCCGT TCCGCGGCCT GCACACGCGC
ATCCGCCAGC TGCGCGACCA CCACGCCGAC CGCCTCGCCG ATACGCTGGC CGCGTGCCGG
CGCGCGCCGA GCTCGGCACG CGACATCGTC GACGTCATCT TCAAGCGCCA GTTCGACGTG
CACCAGATGA CCTTCGCGAT GGGCGAAGCG CTGGCCCACC TGCACGCGCT GTGGCACCGC
GGCGAGGTGG TCCGCGCGCC GGGCGCCGAT GGCATCATCC GATTCCACGC ACCGGCCTGA
 
Protein sequence
MNALEHQLDY PLGDTLPAGG IRHQVAPGIY WLRMPLPFAL DHINLWLLRD RQDGQDGWTI 
VDCGINHEAI RAYWETLFAD GLDGLPVLRV LVTHCHPDHV GLSRWLCEGG DHQRWNVRLW
MSLGDYAFAR MLVGGTGASN AGGESAARHF ARHGLTDAEA VERIRNRKDY YSTLVPGVPE
QYRRIMDGQV IAIGPHRWRV ITGFGHAPEH VALYSEDAGV LISGDMVLPR ISTNVSVFDI
EPEADPLTLY LTSLDKYEAL PEDVLILPSH GRPFRGLHTR IRQLRDHHAD RLADTLAACR
RAPSSARDIV DVIFKRQFDV HQMTFAMGEA LAHLHALWHR GEVVRAPGAD GIIRFHAPA