Gene RSc0280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0280 
Symbol 
ID1219083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp313606 
End bp314103 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content71% 
IMG OID637236637 
Productputative transcription regulator protein 
Protein accessionNP_518401 
Protein GI17544999 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0843024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTCT CTCCTCCGTC CGCTGCCCAC CCCCTCGACG CCGGCCCCGC TGCCGGCGAC 
CCCGACGAGG GCGGCGACGC CAGCTTCACC ATCACCGACC TTGCGCGCGA GTTCGACATC
ACGCCGCGCG CCATCCGCTT CTATGAAGAC CAGGGCCTGC TGTCGCCGGA CCGCCAGGGG
CCGGGCGGGC GCCGCCGGGT CTATTCCGCC CGCGAGCGCA CGCGCCTGAA GCTGACGCTG
CGCGGCAAGC GACTCGGCCT GTCGCTGGGC GAGATCAAGG AAATCCTGGA CCTGTACGAA
TCGCCGCGCG ATACGGTGCC GCAACTGGAG CGCCTGCTGA CGTTCCTGGC GCAGCACCGC
GCGGTGCTGA CGCAGCAGCT GGAAGACCTC AACGCCCAGC TGGCCGAGAT CGACCAGCAC
GAAACGCAAT GCCGCCACCT GCTGGACGAG GCGCGCGGCG GTGCCGCCAA GGCGCCCAAG
CGCCGCAAGG CGGCCTGA
 
Protein sequence
MSVSPPSAAH PLDAGPAAGD PDEGGDASFT ITDLAREFDI TPRAIRFYED QGLLSPDRQG 
PGGRRRVYSA RERTRLKLTL RGKRLGLSLG EIKEILDLYE SPRDTVPQLE RLLTFLAQHR
AVLTQQLEDL NAQLAEIDQH ETQCRHLLDE ARGGAAKAPK RRKAA