Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0280 |
Symbol | |
ID | 1219083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 313606 |
End bp | 314103 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637236637 |
Product | putative transcription regulator protein |
Protein accession | NP_518401 |
Protein GI | 17544999 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0843024 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGTCT CTCCTCCGTC CGCTGCCCAC CCCCTCGACG CCGGCCCCGC TGCCGGCGAC CCCGACGAGG GCGGCGACGC CAGCTTCACC ATCACCGACC TTGCGCGCGA GTTCGACATC ACGCCGCGCG CCATCCGCTT CTATGAAGAC CAGGGCCTGC TGTCGCCGGA CCGCCAGGGG CCGGGCGGGC GCCGCCGGGT CTATTCCGCC CGCGAGCGCA CGCGCCTGAA GCTGACGCTG CGCGGCAAGC GACTCGGCCT GTCGCTGGGC GAGATCAAGG AAATCCTGGA CCTGTACGAA TCGCCGCGCG ATACGGTGCC GCAACTGGAG CGCCTGCTGA CGTTCCTGGC GCAGCACCGC GCGGTGCTGA CGCAGCAGCT GGAAGACCTC AACGCCCAGC TGGCCGAGAT CGACCAGCAC GAAACGCAAT GCCGCCACCT GCTGGACGAG GCGCGCGGCG GTGCCGCCAA GGCGCCCAAG CGCCGCAAGG CGGCCTGA
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Protein sequence | MSVSPPSAAH PLDAGPAAGD PDEGGDASFT ITDLAREFDI TPRAIRFYED QGLLSPDRQG PGGRRRVYSA RERTRLKLTL RGKRLGLSLG EIKEILDLYE SPRDTVPQLE RLLTFLAQHR AVLTQQLEDL NAQLAEIDQH ETQCRHLLDE ARGGAAKAPK RRKAA
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