| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0279 |
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| Symbol | |
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| ID | 1219082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 312256 |
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| End bp | 313437 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637236636 |
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| Product | acyl-CoA dehydrogenase oxidoreductase protein |
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| Protein accession | NP_518400 |
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| Protein GI | 17544998 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.236676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGAAC TGCCCGGCCT GAGATTCGAC CTAGGCGTTG ACATCGAAAT GCTGCGCTCC
GCCGTGCGCG ACTGGGCCCA GGCCGAGCTG GCGCCGCGCG CCGAAGCGAT CGACCGCAGC
GACCAGTTCC CGATGGACGC CTGGAAGCAG ATGGGCGACC TCGGCGTGCT GGGCATCACG
GTGGCGGAGG AATACGGCGG CAGCGGCATG GGCTACCTGG CGCACATGAT CGCCATGGAG
GAGATCAGCC GGGCGTCCGC CTCGGTCGGG CTGTCGTATG GCGCGCACTC CAACCTGTGC
GTCAACCAGA TCCACCGCAA CGGCACGCCG GCGCAGAAGG CGAAGTACCT GCCCAAGCTG
GTGTCGGGCG AGTGGATCGG CGCGCTGGCC ATGAGCGAGC CCAACGCCGG CTCGGACGTC
GTCAGCATGA AGCTGCGCGC CGAGTGCCGC GGCGACCGCT ACGTGCTCAA CGGCACCAAG
ATGTGGATCA CCAACGGGCC GGATTGCGAC GTGCTGGTCG TCTACGGCAA GACCGAGCCG
GAGCTGGGCG CGCGCGGCAT GACGGCCTTC ATCGTCGAGA AAGGCATGAA GGGCTTCTCG
GTGGCGCAGA AGCTGGACAA GCTCGGCATG CGCGGCTCGC ACACGGGCGA GCTGGTGTTC
GACAACGTGG AAGTGCCCGC CGAGAACGTC CTGGGCGAGG AAAACGGCGG CACCCGCGTG
CTGATGAGCG GGCTGGACTA CGAGCGTGCC GTGCTGTCGG GCGGCCCGAT CGGCATCATG
CAGGCGTGCA TGGACGTGGT GACCCCGTAC ATCCACGACC GCAAGCAGTT CGGCCAGAGC
ATCGGCGAAT TCCAGCTGAT CCAGGGCAAG ATCGCCGACA TGTACACCAC GCTGCAGGCC
TGCCGCGCCT ACCTGTACAC GGTCGGCAAG AACCTCGACG CGCTGGGCCG CGAGCACGTG
CGCCAGGTGC GCAAGGACTG CGCGGGCGTG ATCCTCTACA CCGCCGAGAA GGCCACCTGG
ATGGCCGGCG AGGCCATCCA GATCCTGGGC GGCAACGGCT ACATCAACGA ATTCCCGACC
GGGCGGCTGT GGCGCGACGC CAAGCTGTAT GAAATCGGGG CGGGCACGTC GGAAATCCGG
CGCATGCTGA TTGGTCGCGA ACTGTATGCC GAAACCATGT GA
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| Protein sequence | MIELPGLRFD LGVDIEMLRS AVRDWAQAEL APRAEAIDRS DQFPMDAWKQ MGDLGVLGIT
VAEEYGGSGM GYLAHMIAME EISRASASVG LSYGAHSNLC VNQIHRNGTP AQKAKYLPKL
VSGEWIGALA MSEPNAGSDV VSMKLRAECR GDRYVLNGTK MWITNGPDCD VLVVYGKTEP
ELGARGMTAF IVEKGMKGFS VAQKLDKLGM RGSHTGELVF DNVEVPAENV LGEENGGTRV
LMSGLDYERA VLSGGPIGIM QACMDVVTPY IHDRKQFGQS IGEFQLIQGK IADMYTTLQA
CRAYLYTVGK NLDALGREHV RQVRKDCAGV ILYTAEKATW MAGEAIQILG GNGYINEFPT
GRLWRDAKLY EIGAGTSEIR RMLIGRELYA ETM
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