Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0274 |
Symbol | |
ID | 1219077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 305939 |
End bp | 307069 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637236631 |
Product | putative acyl CoA dehydrogenase oxidoreductase protein |
Protein accession | NP_518395 |
Protein GI | 17544993 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0244917 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCCTGA CACCCGAACA AGAGATGATC CGCGACGCCA TCCGCACCTT CGTGCGCGAG GCGATCGTGC CGCACGCGGC CGCGTGGGAC CGCGACGCCA CCTTCCCGAA GGACGTGCAC CGCCAGCTCG GCGAGCTGGG CGCGTACGGC GTGGCGGTGC CGGAGGCCTA CGGCGGCGCC GGGCTGGATT ACCTGTCGCT GGCGCTGATC CTGGAGGAGA TCGCCGCCGG CGACGGCGGC ACCTCCACCG TCATCAGCGT CAACAACTGC CCGGTGTGCA GCATGCTGAT GGCCTATGCC GACGAGGCCC AGAAGCAGCG CTGGCTGGCG CCGCTGGCGC GCGGCGAGAT GCTGGGCGCG TTCTGCCTGA CCGAGCCGCA CGTGGGCTCG GATGCGGCCG CGCTGCGCAC CACCGCCACA CGCGACGGCG AGCACTGGGT GCTCAACGGC GTGAAGCAGT TCATCACCAG CGGCAAGCAC GCGGACGTGG CCATCGTGAT GGCGGTGACC GACAAGGCCG CGGGCAAGCG CGGCATCAGC GCCTTCCTGG TGCCGACCGC CACGCCCGGC TACATCGTCG CGCGGCTGGA GGACAAGCTC GGCCAGCACT CGTCCGACAC CGCGCAGATC GTGCTGGAAG ACTGCCGCAT CCCCGCCGAC TGCCTGCTCG GTTCGGCCGG CGAAGGCTAC AGGATGGCGC TGTCCGGGCT GGAGGGCGGT CGCATCGGCA TCGCCGCGCA GAGCGTGGGG ATGGCGCGCG CGGCCTTCGA GGCGGCGCTG GCCTATGCCA AGGAACGCGA GAGCTTCGGC CAGCCGCTGT TCGCGCACCA GGCGGTGCAG TTCCGCCTGG CCGAGATGGC CACGCGCATC GACGTGGCGC GGCAGATGGT CTGGCACGCC GCCAGCTTGA AGGACGCGGG GCGAGCGTGC CTGAAGGAGG CGGCCATGGC CAAGCTCAAC GCCAGCGAGA TGGCCGAGCG CGTGTGCTCG GATGCCATCC AGGTCTTCGG CGGCTACGGC TACGTGAGCG ATTTTCCGGT CGAGCGCATC TACCGCGACG TGCGCGTCTG CCAGATCTAC GAAGGCACCA GCGACATCCA GAAGATCTTG ATCGCCCGCG CGCTCGCGTA G
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Protein sequence | MLLTPEQEMI RDAIRTFVRE AIVPHAAAWD RDATFPKDVH RQLGELGAYG VAVPEAYGGA GLDYLSLALI LEEIAAGDGG TSTVISVNNC PVCSMLMAYA DEAQKQRWLA PLARGEMLGA FCLTEPHVGS DAAALRTTAT RDGEHWVLNG VKQFITSGKH ADVAIVMAVT DKAAGKRGIS AFLVPTATPG YIVARLEDKL GQHSSDTAQI VLEDCRIPAD CLLGSAGEGY RMALSGLEGG RIGIAAQSVG MARAAFEAAL AYAKERESFG QPLFAHQAVQ FRLAEMATRI DVARQMVWHA ASLKDAGRAC LKEAAMAKLN ASEMAERVCS DAIQVFGGYG YVSDFPVERI YRDVRVCQIY EGTSDIQKIL IARALA
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