Gene RSc0274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0274 
Symbol 
ID1219077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp305939 
End bp307069 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content70% 
IMG OID637236631 
Productputative acyl CoA dehydrogenase oxidoreductase protein 
Protein accessionNP_518395 
Protein GI17544993 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0244917 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCTGA CACCCGAACA AGAGATGATC CGCGACGCCA TCCGCACCTT CGTGCGCGAG 
GCGATCGTGC CGCACGCGGC CGCGTGGGAC CGCGACGCCA CCTTCCCGAA GGACGTGCAC
CGCCAGCTCG GCGAGCTGGG CGCGTACGGC GTGGCGGTGC CGGAGGCCTA CGGCGGCGCC
GGGCTGGATT ACCTGTCGCT GGCGCTGATC CTGGAGGAGA TCGCCGCCGG CGACGGCGGC
ACCTCCACCG TCATCAGCGT CAACAACTGC CCGGTGTGCA GCATGCTGAT GGCCTATGCC
GACGAGGCCC AGAAGCAGCG CTGGCTGGCG CCGCTGGCGC GCGGCGAGAT GCTGGGCGCG
TTCTGCCTGA CCGAGCCGCA CGTGGGCTCG GATGCGGCCG CGCTGCGCAC CACCGCCACA
CGCGACGGCG AGCACTGGGT GCTCAACGGC GTGAAGCAGT TCATCACCAG CGGCAAGCAC
GCGGACGTGG CCATCGTGAT GGCGGTGACC GACAAGGCCG CGGGCAAGCG CGGCATCAGC
GCCTTCCTGG TGCCGACCGC CACGCCCGGC TACATCGTCG CGCGGCTGGA GGACAAGCTC
GGCCAGCACT CGTCCGACAC CGCGCAGATC GTGCTGGAAG ACTGCCGCAT CCCCGCCGAC
TGCCTGCTCG GTTCGGCCGG CGAAGGCTAC AGGATGGCGC TGTCCGGGCT GGAGGGCGGT
CGCATCGGCA TCGCCGCGCA GAGCGTGGGG ATGGCGCGCG CGGCCTTCGA GGCGGCGCTG
GCCTATGCCA AGGAACGCGA GAGCTTCGGC CAGCCGCTGT TCGCGCACCA GGCGGTGCAG
TTCCGCCTGG CCGAGATGGC CACGCGCATC GACGTGGCGC GGCAGATGGT CTGGCACGCC
GCCAGCTTGA AGGACGCGGG GCGAGCGTGC CTGAAGGAGG CGGCCATGGC CAAGCTCAAC
GCCAGCGAGA TGGCCGAGCG CGTGTGCTCG GATGCCATCC AGGTCTTCGG CGGCTACGGC
TACGTGAGCG ATTTTCCGGT CGAGCGCATC TACCGCGACG TGCGCGTCTG CCAGATCTAC
GAAGGCACCA GCGACATCCA GAAGATCTTG ATCGCCCGCG CGCTCGCGTA G
 
Protein sequence
MLLTPEQEMI RDAIRTFVRE AIVPHAAAWD RDATFPKDVH RQLGELGAYG VAVPEAYGGA 
GLDYLSLALI LEEIAAGDGG TSTVISVNNC PVCSMLMAYA DEAQKQRWLA PLARGEMLGA
FCLTEPHVGS DAAALRTTAT RDGEHWVLNG VKQFITSGKH ADVAIVMAVT DKAAGKRGIS
AFLVPTATPG YIVARLEDKL GQHSSDTAQI VLEDCRIPAD CLLGSAGEGY RMALSGLEGG
RIGIAAQSVG MARAAFEAAL AYAKERESFG QPLFAHQAVQ FRLAEMATRI DVARQMVWHA
ASLKDAGRAC LKEAAMAKLN ASEMAERVCS DAIQVFGGYG YVSDFPVERI YRDVRVCQIY
EGTSDIQKIL IARALA