Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0256 |
Symbol | dehH |
ID | 1219059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 288087 |
End bp | 289013 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637236613 |
Product | haloacetate dehalogenase H-1 protein |
Protein accession | NP_518377 |
Protein GI | 17544975 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.518254 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAGCAT CGCCCACCCT CGAAGTCGCG ATCGCCGCCG CCGACCGAGC CCTGTTCCCC GGCTTCCGCC CATTCAGGCA AGCGGCCAAC GGCGTGGAGA TCGCCGGGGT CATCGGCGGA AGCGGCCCGC CGCTGCTGTT GCTGCACGGG CATCCGCAGA GCCACGTGAT CTGGCACAAG GTGGCGCGCG AGCTGGCCCG CGAGCACACC GTGGTCGCCA CCGACCTGCG CGGCTACGGC GCCTCGTCCA AGCCGGCCGG CAGCGCCACG CACGTCGAGT ACAGCAAGCG CGCGATGGCG CAGGATCAGG TGGACGTCAT GCGCGCGCTC GGCTTCGAGC GCTTCGGCCT GTGCGCCCAC GATCGCGGCG CGCGTGTCGC CCATCGCTTG TGCGTCGATC ATGCCGGGCG CGTCGAGCGC GCGATGCTGC TCGACATCGC CCCCACGCTG GCGATGTACG AACAGACCAA CATGGCCTTC GCCGCCGCCT ACTGGCACTG GTTCTTCCTG ATCCAGCCGG CGCCGTTTCC CGAGACGCTC ATCCATGCCA CGCCCGATTT CTACATCGGC AAGCTGATGG GGCTGCGGCA TGCCGGCCTT GCGCCCTTCG CGCCGGAAGC CATGGCCGCC TATGCCGCCG CCATGCGCGA ACCGGCCTGC GTGCACGCCA TGTGCGAGGA CTACCGCGCC GCCGCCACCA TCGACCTGGA GCACGATCGC GCCGACCGCG CGGCCGGCCG ACGCATCGCG GTGCCGCTGC GCGTGCTGTG GGGGCAGCAT GGCGTGATCC AGCGGTGCTT CGAGCCTCTG GCGCTGTGGC GCGCTGTGGC CGAGGACGTC AGCGGCGGCA CGGTGCCGTG CGGGCACTAT GTGCCGGAGG AGGCGCCGGA CGCATTGCTG GCGGAGATGC GGGCGTTTTT CGGCTGA
|
Protein sequence | MTASPTLEVA IAAADRALFP GFRPFRQAAN GVEIAGVIGG SGPPLLLLHG HPQSHVIWHK VARELAREHT VVATDLRGYG ASSKPAGSAT HVEYSKRAMA QDQVDVMRAL GFERFGLCAH DRGARVAHRL CVDHAGRVER AMLLDIAPTL AMYEQTNMAF AAAYWHWFFL IQPAPFPETL IHATPDFYIG KLMGLRHAGL APFAPEAMAA YAAAMREPAC VHAMCEDYRA AATIDLEHDR ADRAAGRRIA VPLRVLWGQH GVIQRCFEPL ALWRAVAEDV SGGTVPCGHY VPEEAPDALL AEMRAFFG
|
| |