Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0254 |
Symbol | |
ID | 1219057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 285153 |
End bp | 286781 |
Gene Length | 1629 bp |
Protein Length | 542 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637236611 |
Product | hypothetical protein |
Protein accession | NP_518375 |
Protein GI | 17544973 |
COG category | [S] Function unknown |
COG ID | [COG5361] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.530486 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGGATTG ACGATCCGCG CGGCGAGAAG CGCAAGCATC CTTGGGGGGA TGATCGACAG GCGTCCGGTT CCCTGTCGGT GCGCGCCGAC AAGAAGGAGA ACACGATGAC GCATCGCCAT GCGCCCGCGC GCCGGCTCAC GAGGCTGGTC GCCCTGGCGC TGAGCGTGGC CGCGCCTGTC CTGACCGGCT GCTCCACTCC ACCGGGCCCG GCCCCCGTCG CGGCCGTCGC GCCGCGCAGC CCGCAAGCGC CGGATGCACT CGCCAGGTCC GTCTATGTCT ACGCCTTTCC GCTGATGATG ACGGATGCGC TGCAGCGGAC CGCCTCGGTG CAAGCACCGG CAGGCCGTTT CCTGCATCAG CGCAGCCTGG ACGACGATGC GCTGCCGCCC GGCGTGCGCG CCCGTGCCGA CACGCTGGCC AGCAGCGCCT TCCTGGACCT GCGCGACGGC CCCATCGTGC TCAGCGTGCC GGATCTTGGG CTGCGCCACG CATGGGTCTC GCTGTACGAC GCCTGGACCG ACATCTTCGA CACCCTGGGC AGCCGCACCA CCGGCGCGCG CGCCCTGCAG GTCGCCATCA CGCCGCCCGG CTGGACAGGC GTGCTGCCGG CCGGCGTGCG CGCCATCGCC GCGCCGACGC CGATGGTGTG GGTGGTCGCC CGCGTGCAGG TCAGCGGCCC GCGCGACGAA GCGGTCGCGC GGCGGCTGCA GGATCGCTTC CGGCTGACGC CGCTGGAAGA CCTCAACAAG CCGCCGGCAC GCGAGGCGCA CGAGAGGCGC CGGCCCGATG CCGACCTCGC CCAGAACGCC GCCCCGCAAC GCACGACAGC ACCGGATGCC AACGCGGGTT TCACGCGCAT GGCCACCCTG CTCAAGGACA AGCCCGACAC CGGCGCCACC CTGGCCGAGG CCCGGCAACA GGTGACGGCG CTGGACGCCA ATGCGTATTT CGCGCGCTTT TCCGCCCTGC TCAAGGACAA CCCGCCGCAC CCCGCCGACT CGACCATGCT GCAGAGCGTG CGAGCGCTGG GCATCGCGCC CGGCATGCCG GTCGACCTCA ACCGGGATGC CGCCGGCGAG GCCATCGAAC GCGGTGCCGC CGCGGCACGC GACAGCCTGG CCATCGCCGC CAGGCAGCCG CCGATCACAC AGAACGGCTG GTTCATCCCG CGCAACATCG GTGCCTACGG GCTCGACTAT GAGCAGCGCG CCATCGTCGC CTGGGACGGC GCCGGCACCG ACCTGCCGCA GGACGCGCTC ATCGCGCGCA CCAGCACCGA CGCGGACGGC ATGCCGCTCG ACAGCATGCA CCGCTACGTC CTGCATTTCG ACCCAGGTCA ACTGCCGCCC GAAAACGCCG GCTGGGCGCT GGCCGCGGTC GGCATCGCCC GCCGCCCGTC GCAGCCCGGC GGGCGCCGCG ACCTGCTGAG CGCGGCCGAT CGCCCGCGTC CCAACCGCGA CGGCTCGCTG GACATCTACC TCCAGCGCGA CCCGCCACCC AAGGGCAGCC GCGCCAACTG GCTGCCCGTG CCAACCGGCC CGTTCATCGT GCGCCTGACG CTGGCGTGGC CCAAGGAGGC CGCGCTGGAC GGCTCGTGGC TGCCGCCCGT CGTGCAGCGA CAGGAATAG
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Protein sequence | MRIDDPRGEK RKHPWGDDRQ ASGSLSVRAD KKENTMTHRH APARRLTRLV ALALSVAAPV LTGCSTPPGP APVAAVAPRS PQAPDALARS VYVYAFPLMM TDALQRTASV QAPAGRFLHQ RSLDDDALPP GVRARADTLA SSAFLDLRDG PIVLSVPDLG LRHAWVSLYD AWTDIFDTLG SRTTGARALQ VAITPPGWTG VLPAGVRAIA APTPMVWVVA RVQVSGPRDE AVARRLQDRF RLTPLEDLNK PPAREAHERR RPDADLAQNA APQRTTAPDA NAGFTRMATL LKDKPDTGAT LAEARQQVTA LDANAYFARF SALLKDNPPH PADSTMLQSV RALGIAPGMP VDLNRDAAGE AIERGAAAAR DSLAIAARQP PITQNGWFIP RNIGAYGLDY EQRAIVAWDG AGTDLPQDAL IARTSTDADG MPLDSMHRYV LHFDPGQLPP ENAGWALAAV GIARRPSQPG GRRDLLSAAD RPRPNRDGSL DIYLQRDPPP KGSRANWLPV PTGPFIVRLT LAWPKEAALD GSWLPPVVQR QE
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