Gene RSc0247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0247 
SymboltISRso6a 
ID1219050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp275259 
End bp276302 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content62% 
IMG OID637236604 
ProductISRSO6-transposase ORFA protein 
Protein accessionNP_518368 
Protein GI17544966 
COG category[L] Replication, recombination and repair 
COG ID[COG4584] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0946447 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTAC AGATTCTGCG TCGCCAGGGC TGCAGTTTGC GTGCGATCGC AACCGAGACT 
GGCATGGCCG TGAACACCAT CAGGAAGTAC CTGGTGTCCG GCGCGCCCGA GCGCAAGCCA
CGCGAGCCGG TGGTGGGCAA GTTGGAGCCG TTCAAGGCCT TCATACAGTC CCGCGTTGAC
GCCGCACGTC CGGACTGGAT TCCGGCGACG GTGCTGTTGC GCGAGATCGA GGAGCGTGGG
TACACCGGCA AGCTGCGCAT TGTTCAGGAA TACCTGCAAA CGCTGCGGCC CGCCAGCCGG
CCCGATCCGG TTGTGCGGTT CGAGACGGAA CCCGGCCAGC AAATGCAGAT GGATTGGATC
GAATTCCGCA AGACCGGGCA CAAGCACGGC ATGCTGGCGG CATTCGTTGC CACGTTGGGA
TACAGCCGAG CCAGCTATGT CGAGTTCGTT TCCGACATGC GCCTGGAGAC CTTGCTCACC
TGCCATGTGC GTGCATTCGA TGCCTTTGGC GGAGTCACCA AGGAGATCCT GTACGACAAC
ATGAAGACGG TGATCCTGCA GCGCAATGCC TACGGTAAGC AACAGCATCG GTACCAACCA
GGCTTTGCCG ACTTCGCCAA GCACTATGGG TTCGCGCCGC GCGTGTGCAA GCCCTACCGG
GCGAAGACGA AGGGCAAAGT CGAGCGGATG AACGGCTACC TGCGCTACAG CTTCTGGGTC
CCGTTGGCTT CCAAGCTCAA GCAGATCGGC TTGGCTGCGG ACAAGGATCT GTGCAATCAA
CAGGTTGGCC TCTGGCTGCG GGATGTGGCC AATGTCCGCG TTCACGGCAC GACGAAGCGC
GTTCCCGTGG ACGTCCTGAG AGAGGAACGA CCGCATCTGC TGCCAACGCC GGCACTCTAT
GCCGGGCGAT CGGTGCGCGC CGGTGCAACG CCTCACGAGA CGCCCAAGCC GGCCTCCAGG
TTTGCGACGC CGGACTGGCA TGTCTGCTTG CAGCACCCGC TGTCCGTCTA CGATTCCTTC
TGCCAGCAGG GAGTCGCCGC ATGA
 
Protein sequence
MEVQILRRQG CSLRAIATET GMAVNTIRKY LVSGAPERKP REPVVGKLEP FKAFIQSRVD 
AARPDWIPAT VLLREIEERG YTGKLRIVQE YLQTLRPASR PDPVVRFETE PGQQMQMDWI
EFRKTGHKHG MLAAFVATLG YSRASYVEFV SDMRLETLLT CHVRAFDAFG GVTKEILYDN
MKTVILQRNA YGKQQHRYQP GFADFAKHYG FAPRVCKPYR AKTKGKVERM NGYLRYSFWV
PLASKLKQIG LAADKDLCNQ QVGLWLRDVA NVRVHGTTKR VPVDVLREER PHLLPTPALY
AGRSVRAGAT PHETPKPASR FATPDWHVCL QHPLSVYDSF CQQGVAA