Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0247 |
Symbol | tISRso6a |
ID | 1219050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 275259 |
End bp | 276302 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637236604 |
Product | ISRSO6-transposase ORFA protein |
Protein accession | NP_518368 |
Protein GI | 17544966 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4584] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0946447 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGTAC AGATTCTGCG TCGCCAGGGC TGCAGTTTGC GTGCGATCGC AACCGAGACT GGCATGGCCG TGAACACCAT CAGGAAGTAC CTGGTGTCCG GCGCGCCCGA GCGCAAGCCA CGCGAGCCGG TGGTGGGCAA GTTGGAGCCG TTCAAGGCCT TCATACAGTC CCGCGTTGAC GCCGCACGTC CGGACTGGAT TCCGGCGACG GTGCTGTTGC GCGAGATCGA GGAGCGTGGG TACACCGGCA AGCTGCGCAT TGTTCAGGAA TACCTGCAAA CGCTGCGGCC CGCCAGCCGG CCCGATCCGG TTGTGCGGTT CGAGACGGAA CCCGGCCAGC AAATGCAGAT GGATTGGATC GAATTCCGCA AGACCGGGCA CAAGCACGGC ATGCTGGCGG CATTCGTTGC CACGTTGGGA TACAGCCGAG CCAGCTATGT CGAGTTCGTT TCCGACATGC GCCTGGAGAC CTTGCTCACC TGCCATGTGC GTGCATTCGA TGCCTTTGGC GGAGTCACCA AGGAGATCCT GTACGACAAC ATGAAGACGG TGATCCTGCA GCGCAATGCC TACGGTAAGC AACAGCATCG GTACCAACCA GGCTTTGCCG ACTTCGCCAA GCACTATGGG TTCGCGCCGC GCGTGTGCAA GCCCTACCGG GCGAAGACGA AGGGCAAAGT CGAGCGGATG AACGGCTACC TGCGCTACAG CTTCTGGGTC CCGTTGGCTT CCAAGCTCAA GCAGATCGGC TTGGCTGCGG ACAAGGATCT GTGCAATCAA CAGGTTGGCC TCTGGCTGCG GGATGTGGCC AATGTCCGCG TTCACGGCAC GACGAAGCGC GTTCCCGTGG ACGTCCTGAG AGAGGAACGA CCGCATCTGC TGCCAACGCC GGCACTCTAT GCCGGGCGAT CGGTGCGCGC CGGTGCAACG CCTCACGAGA CGCCCAAGCC GGCCTCCAGG TTTGCGACGC CGGACTGGCA TGTCTGCTTG CAGCACCCGC TGTCCGTCTA CGATTCCTTC TGCCAGCAGG GAGTCGCCGC ATGA
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Protein sequence | MEVQILRRQG CSLRAIATET GMAVNTIRKY LVSGAPERKP REPVVGKLEP FKAFIQSRVD AARPDWIPAT VLLREIEERG YTGKLRIVQE YLQTLRPASR PDPVVRFETE PGQQMQMDWI EFRKTGHKHG MLAAFVATLG YSRASYVEFV SDMRLETLLT CHVRAFDAFG GVTKEILYDN MKTVILQRNA YGKQQHRYQP GFADFAKHYG FAPRVCKPYR AKTKGKVERM NGYLRYSFWV PLASKLKQIG LAADKDLCNQ QVGLWLRDVA NVRVHGTTKR VPVDVLREER PHLLPTPALY AGRSVRAGAT PHETPKPASR FATPDWHVCL QHPLSVYDSF CQQGVAA
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